Clupea harengus (Atlantic herring): 122130466
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Entry
122130466 CDS
T09045
Name
(RefSeq) syntaxin-binding protein 1-like
KO
K15292
syntaxin-binding protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122130466
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
122130466
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122130466
SNARE
SNARE associated proteins
Syntaxin-binding proteins
122130466
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122130466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
YlbD_coat
DUF2408
FRB_dom
Motif
Other DBs
NCBI-GeneID:
122130466
NCBI-ProteinID:
XP_042561121
UniProt:
A0A6P8FL33
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MPTLGLKAVVCEKIMNDVIKKVRVKGEWKALVVDRLSMKMISSCCKMTDIMSEGITIVED
ITKKREPLPSMEAIYLISPNDESVEGLISDFRDPRNTMYRGAHVFFTDTIPDSLFNLLTK
SRASKVMKTLTEIHIAFLPYESQVYSLDKPDSFQDFYSPFKEDVKTPMMERLAEQLATLC
CTLKEYPAVRYRVEHKDNAILAQFLQDKLDGYKADDPTMGEGPDKARSQLLILDRGFDPV
TPVLHELTLQAMSYDLLPIENDVYQFETSGMGETRMKDVLLDEDDDLWMTLRHKHIAEVS
TAVTKSLKDFTSSKKMNTGEKTSLKELSQMLKKMPQYQKELGKYSTHLHLAEDCMNQYQG
TVDKLCRVEQDLAMGADAEGEKIKDPMRAIVPVLLDANITVHDKLRIILLYIFMKNGVSE
ENLCKLLQHANIPPEDSDIISNMGNLGMPVIIETAPKKTKKPDRKERVSEQTYQLSRWTP
LVKDLMEDAIEDKLDPKLYPFISTRTAASSKTTTASSARYGNWHKNKSPSEQRTGPRVIV
FIIGGVTYSEMRCVYEVTQANGKWEALVGSNDIITPTSLLQAVRDMNKPDYRLDL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccctcgggctcaaggcggttgtctgcgaaaagattatgaacgatgtcatcaag
aaagtcagagtgaaaggagaatggaaggcgttggttgtggacaggctcagcatgaagatg
atctcttcgtgctgcaagatgacggacattatgtctgagggcatcacaatcgtcgaggac
atcactaaaaaacgtgagcccctgcccagcatggaagccatctatctcatctcacccaat
gatgaatctgtagaaggcctcatcagtgacttccgggatccccgcaacaccatgtacagg
ggggctcacgtcttcttcacagatactatcccagactccctgttcaacctgctgaccaaa
tcccgggcctccaaagtcatgaaaaccttgactgagattcacatagcctttctaccctac
gaatcacaggtgtactccttggacaaaccagattccttccaagacttctacagccccttc
aaggaggacgtgaagaccccgatgatggagcgtctggctgagcagctggccaccctgtgc
tgtacgctcaaagagtaccctgccgtgcgctacagagtggaacacaaagacaacgccatt
ctggctcagtttctgcaggacaagctggacgggtacaaggcagacgaccccaccatggga
gagggtccagataaggctcggtctcagctgttgatcctggacagaggctttgaccccgtg
acccctgtgctgcacgagctcaccctccaggccatgagctatgacctgctgcccattgaa
aatgacgtttaccagtttgagaccagtggaatgggagagactcgcatgaaagacgttctt
ctggatgaggatgatgacctttggatgaccttgcgtcacaagcacattgcagaagtatcc
acggcagtgacaaaatctctgaaggacttcacgtcaagcaaaaagatgaacacaggagag
aagacctcactaaaggagctatcacagatgttgaagaagatgccacagtatcagaaggag
ctgggcaagtactccactcatctacacctggctgaggactgcatgaatcaatatcagggc
accgtggacaagctgtgtcgcgtggaacaggacctggccatgggtgcggacgcagagggg
gagaagatcaaggaccccatgagggccatcgtgcccgtcctgctcgatgccaacatcacc
gttcacgataagctccgcatcatcctgctgtacatcttcatgaagaatggtgtctctgaa
gagaacctttgtaaactcctgcagcatgccaacatccccccagaggacagtgacatcatc
tccaacatgggaaacttgggaatgcccgtcatcatagagacagcgccaaagaaaacaaag
aagcctgaccgcaaggagagggtcagtgagcagacatatcagctctcccgatggacccca
ctggtcaaagacctcatggaggatgccattgaggacaaactggatcccaaactgtatccg
ttcatctccactcgcaccgctgcttcttccaaaaccaccacggcttcaagtgctcgctat
ggcaactggcacaagaacaagagcccgagcgagcagcgcactggccctcgcgtcattgtc
ttcatcatcggcggcgtgacttacagcgagatgcgctgcgtctacgaggtcacacaagcc
aacgggaagtgggaggctctcgttggatcgaacgacatcatcacccctactagccttctc
caagccgtcagagacatgaacaaacctgattataggctggacctctga
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