Clupea harengus (Atlantic herring): 122130553
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Entry
122130553 CDS
T09045
Symbol
si:dkey-28b4.8
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04148
Efferocytosis
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122130553 (si:dkey-28b4.8)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122130553 (si:dkey-28b4.8)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122130553 (si:dkey-28b4.8)
04261 Adrenergic signaling in cardiomyocytes
122130553 (si:dkey-28b4.8)
Enzymes [BR:
char01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
122130553 (si:dkey-28b4.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
EAD2
Peptidase_M24
LPG_synthase_TM
Motif
Other DBs
NCBI-GeneID:
122130553
NCBI-ProteinID:
XP_042561196
UniProt:
A0A8M1KAW1
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MDSAHTKTVEEVLGYFSVNESTGVSSEQLRKGRETWGPNELPAEEGKSLWSLVLEQFEDL
LVRILLLAACISFTLAWFEEGEGTITAFVEPFVILLILIANAIVGVWQERNAENAIEALK
EYEPEMGKVYRQDRKSVQRVRAREIVPGDIVEVAVGDKVPADIRLTSIRSTTLRVDQSIL
TGESVSVLKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAMGVVVATGVHTEIGKIRDEMA
ATDPERTPLQQKLDQFGEQLSKVITLICVAVWGINIGHFSDPVHGGSWLRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRLFVMDSVSGDRCILNEFTVTGSTYAPEGEAYKDGAAVRCSQYEGLVELATICALC
NDSSLDYNESKGVFEKVGEATETALCCLVEKMNVFDTDLRGLSPVERANACCSVIKQLMR
KELTLEFSRDRKSMSVFCSPNKLTRSTSGAKMFVKGAPESVLERCTWMRLGGGVRLPMTA
GLREQLLETVREWTSGRDTLRCLAMATRDVPPDPRTLNVENCATFANYESDLTFIGCVGM
LDPPRKEVLNAVRMCRQAGIRVIMITGDNKNTAMSICRRVGIITEQEEEEGQGGPFRGGL
TGREFDELPPHLQRQACRTARCFARVEPTHKSRIVEYLQSLNDITAMTGDGVNDAPALKK
AEIGIAMGSGTAVAKSASEMILADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV
CIFLTAALGMPEALIPVQLLWVNLVTDGFPATALGFNPPDLDIMSRPPRNPKEPLISAWL
FCRYLIIGCYVGAATVGAAAWWFMAAQDGPKLSFYQLSHYLQCSEGSAEFAGVQCSVFES
PYPMTMALSVLVTIEMCNALNSLSENQSLLKMPPWSNPWLVGAICLSMALHFLILYVDPL
PVVFQIRPLSWHQWVTVLKMSLPVIMMDEALKFLARNYIEPGNELEQDEEERPHGHSDGA
AGRLVGSVKRALKGVSWTFVFISAPLLLWIYSLDSDITNIFWE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgcccatacaaagacggttgaggaggtgttggggtacttctctgtgaatgag
tcaactggagtaagctctgagcagctgaggaaaggtcgggagacatggggcccaaatgag
ttgcctgctgaagaagggaagtccttatggtcgcttgttctggagcagtttgaggatctg
ctggtgcggatcctcttgctggcagcctgtatctcttttaccttggcctggtttgaggag
ggagaaggcaccatcacagcctttgtggagccctttgtcattctcctcatcctcattgca
aatgctattgttggggtgtggcaggaacgcaacgcagagaatgccatcgaggcactgaag
gagtatgagcccgagatgggcaaggtgtatcgccaggacaggaagagtgtccagcgggtc
cgggccagagagattgtaccaggggacatagtggaggtggcagtgggtgacaaggtccca
gcagacatccgcctgacctccatccgctccaccacactacgagtggaccagtccatttta
acaggggagtccgtgtctgtgctgaagcacaccgacccggtgcctgatccgcgtgctgtc
aaccaggacaagaagaacatgctattctcgggtacgaacatcgctgcaggcagagccatg
ggggtggtggtggccacgggggtgcacacagagatcgggaagatccgtgacgaaatggcg
gccacagacccagagaggacccccctgcagcagaaactggaccagtttggggagcagctg
tccaaggtgatcacattgatctgtgtggcagtgtggggcatcaacatcggccacttcagt
gaccctgtgcatggaggcagttggcttaggggcgcggtctactacttcaagattgctgtg
gcgcttgcagtagctgccatccctgaaggtctacccgctgtgatcaccacctgcttggca
ctgggcacccgccgcatggcacggaagaatgccatagtccgctcattgccgtcagtggag
acgctaggctgtacctccgtcatctgctccgacaagacgggcaccctcaccaccaatcag
atgtctgtctgcaggttgtttgttatggatagtgtgtctggtgacagatgcatcctgaat
gagtttacagtgactggatctacttacgctcctgagggtgaagcgtataaggatggtgca
gcagtgcgctgtagtcagtatgaaggcttggtggagttggctaccatttgcgcactatgt
aatgactcatccttagactacaatgagtcaaagggtgtgtttgagaaggtgggagaagcc
acagagacggcgctgtgctgtctggtggagaagatgaacgtgtttgacactgacctaagg
ggcctcagcccagtggagagagctaacgcctgctgctcggtgattaagcagttgatgagg
aaggagctgacactggagttctctcgagacagaaagtctatgtctgtcttctgctccccc
aacaagctcaccaggtccacctccggtgccaagatgtttgtaaagggtgctccagagagc
gtgctggagcgctgcacctggatgcgtttgggtgggggtgtccggctgcccatgacagcg
ggcctgagagagcagctgctggagacggtgagggagtggacctcgggccgcgacacgctg
cgctgcctggccatggccacccgcgacgtcccgccagacccgcgcacgctcaacgttgag
aactgcgctacgtttgccaactatgagtcggacctcacatttattgggtgtgtggggatg
ttggaccctccgaggaaagaagtgcttaatgccgtccgaatgtgcagacaagcaggcata
cgagtcatcatgatcaccggggacaacaagaacaccgccatgtccatctgccgacgcgtg
ggcatcatcaccgagcaggaggaagaggagggccagggcgggcccttcagggggggtctg
actggcagggagttcgatgagctgcctccccacctccagagacaggcctgccgcaccgcc
cgctgcttcgcccgcgtggagcccacccacaagagccgcatcgtagagtacctgcagagc
ctcaatgacatcacagccatgactggcgatggcgtgaacgatgccccggccctgaaaaaa
gcagagatcggcatcgcgatgggctcagggacagcggttgccaagtccgcctccgagatg
atcctggcggatgataacttctctaccattgttgcggccgtagaagagggcagggccatc
tacaacaacatgaagcagttcatccgctacctgatctcctccaacatcggagaggtggtc
tgtattttcctgacagcagctctgggaatgcctgaggccctgatcccagtgcagctgctg
tgggtgaacctggtgacagacggcttcccagccacggccctgggctttaacccccccgac
ctggacatcatgtcccggcccccacgcaaccccaaagagcccctcatctctgcctggctc
ttctgcagatatctcatcattggctgttatgtcggagctgccaccgtgggtgcggctgcc
tggtggtttatggctgctcaagacggccccaaactctccttctaccagctgtcccattac
ctgcagtgcagtgaaggcagtgctgagtttgctggggtgcaatgctctgtctttgagtct
ccctaccctatgaccatggctctgtctgtactcgttactatagagatgtgcaacgcactg
aacagcttgtcagaaaatcagtccctgttgaagatgcctccgtggtccaacccctggctg
gtgggggccatctgcctctccatggcgcttcacttccttatcctctacgttgaccccctg
cccgtggttttccagatccggccactctcctggcaccagtgggtgactgtgctgaagatg
tccctgccagtcatcatgatggacgaggcccttaagttcctggcacggaactacattgag
cccggcaatgagctagagcaggacgaggaggagcgcccgcacggccacagcgacggggca
gcaggcaggctggtggggtcggtgaaaagagccctgaagggtgtttcgtggaccttcgtc
ttcatctctgcccctctgctgctgtggatctacagcctggactcagacatcaccaacatc
ttctgggagtga
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