Clupea harengus (Atlantic herring): 122130570
Help
Entry
122130570 CDS
T09045
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
122130570
04121 Ubiquitin system [BR:
char04121
]
122130570
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
122130570
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122130570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
122130570
NCBI-ProteinID:
XP_042561210
UniProt:
A0A8M1KFB0
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MAAMESPRRIRPAPASLKAAIWQHFGFYEIDGKMDKTYTICKVCRSKIKYFGNTTNLHSH
ISRHHSELGGKKAPIPDSSQMTIEQALVQLPPNSERAKRITKSIARFIAVDLRPYSVVEN
VGFQGMVNTLDPKYKIPSRRYFTDTAIPTLYSETKAKVLDTLMEAGRVALTCDAWTSIAT
VSYVTITAHFINKDWQLVSLVLQTRAMYESHTGANVADLLKRVAEEWHLNDVVLVTDNAA
NMVVAAQLGGLVHVRCYAHTLNLACQRALKLPSVSRLLARIRRIVSFFHRSTVGAYELGE
KQKLLGLPCHKLITDVSTRWNSAFEMVDRFLEQQPAICATLLSPQVRKGESDLCTLNETD
VSNAEDLVKALKPMKDVTTLISEESSPTVCLIAPLQAQLCQETTGNIAESSIIRDIKKAI
NEDLSKRYTSDLERRTLRSASALDPRFKGLPFLSEEDIVDTFGRVVAEAASLEQQVRVEE
DESQHNTEGTHPTEEQNQSSSPPKRRVAPSLQFPSPPKRRAPSSLLENLLGNTFPIATAQ
QPISAYAKAEEEVTKFRGAPPIPLSEDPLSWWRKNDVMYPLLSKLGKRYFCIPATSVSAE
RVFSTAGDIVTAQRSTLTPEHVDQLLFLHKNLHIP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatggagagccctagacgtatacgacctgcaccggcttctttaaaagctgcc
atatggcagcattttggattttatgagattgacggcaagatggacaagacttacaccatc
tgtaaggtctgtagaagtaaaataaaatacttcggaaacacaacaaatctgcatagccac
atttcccgacaccactcagagttgggaggaaaaaaggcacccattcctgatagcagccag
atgacgatcgaacaggcactggtacaactgccacccaactcagagagggccaaacggatt
acgaaatccattgccagatttattgcagtggatttaaggccgtattcagttgtggagaac
gtgggttttcagggaatggtgaatacactggatccgaagtacaaaataccttctcggcgt
tacttcaccgacacagctataccaacgctgtacagtgagaccaaagcgaaagttttggac
actttgatggaagcgggtagggtggcgttaacatgcgacgcatggacatcaatagccacg
gtgtcctacgtgaccataactgcgcatttcattaacaaagattggcagcttgtgtccctt
gtgctccaaacaagagcaatgtatgagagtcacacgggtgcaaacgtggctgacttgtta
aagagggtagcagaggaatggcatctgaatgacgtcgttttagtcacagacaatgctgcc
aatatggttgttgcagcccaacttggtggacttgtgcatgtgcgatgctacgcccacacc
ttaaacctggcttgtcagcgagcgctcaagctgccatctgtgtccaggctcctggctagg
attagacgaattgtttcgtttttccaccggagcaccgtcggcgcatacgagctaggagaa
aagcagaagctgctgggtctgccatgccacaaactcataacagacgtcagcacccgatgg
aacagtgcctttgagatggtggatcgttttttggaacagcagcctgctatctgcgccact
ttactctctccccaggtgaggaaaggagaatctgatctctgtactctcaatgagaccgat
gtctccaacgcagaggatttagttaaggccctcaagccaatgaaagatgttactacactt
atatcagaggagagtagccccactgtgtgtttgattgccccactgcaagctcaactctgc
caggaaacgacgggcaacattgcagagtcatcaattatccgcgatataaagaaggccatc
aatgaggacctcagcaaaaggtacacgtctgacctagagagaagaacacttcgttcagct
tccgctctggacccgagatttaagggactgcctttcctttctgaagaggatatagtggac
acatttggaagagttgttgctgaagctgcatcacttgagcaacaggtaagagtggaagaa
gatgaaagccaacacaacacagagggcacccaccctacagaggagcagaaccaaagctcc
tcccctcccaagagaagagttgccccctctttgcaattcccctctcctcctaagagaaga
gctccatcctctttgttggagaatctgctggggaataccttccctattgcaacagctcag
cagcccatctctgcctatgctaaagctgaggaggaggttaccaagttccgtggtgctcca
ccaattcctctgtctgaggaccctctcagctggtggagaaaaaatgatgtgatgtatccc
ttgctttccaagttgggcaagcgatacttctgtattccggccaccagtgtctctgcagaa
agagtgttctctactgcaggggatattgtgactgcccagcggagcacactcacaccagag
catgtcgaccagctcctgttcttacacaagaacttgcatattccatga
DBGET
integrated database retrieval system
