KEGG   Clupea harengus (Atlantic herring): 122130640
Entry
122130640         CDS       T09045                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 10-like
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122130640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    122130640
   03036 Chromosome and associated proteins [BR:char03036]
    122130640
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122130640
   Coactivators
    SAGA/TFTC/STAGA complex
     122130640
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     122130640
    STAGA complex
     122130640
    TFTC complex
     122130640
    SAGA complex
     122130640
    SLIK complex
     122130640
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 122130640
NCBI-ProteinID: XP_042561312
UniProt: A0A8M1KBP0
LinkDB
Position
Unknown
AA seq 136 aa
MATPSSDASVSNGVYXLPGIANGDVKPAISTTPLADFLMQLEDYTPTIPDAVTGYYLNRA
GFEASDPRIIRLVSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKDKKYTLTMEDLAP
ALSEYGINVKKPHYFT
NT seq 411 nt   +upstreamnt  +downstreamnt
atggcgaccccatcctctgacgcatcggtgtcaaacggagtgtacnnattgccgggtatc
gccaacggagacgtgaagccggccatttccaccacgcccctggccgacttcctgatgcag
ttggaggactacacacccacgatcccagatgcagtgacgggttactacctcaaccgcgct
ggatttgaggcctcagaccctagaataatccgtctcgtctcactggctgcccagaagttc
atctcagatatcgctaacgatgcgctccagcactgcaagatgaagggaactgcttcagga
agctccaggaataagactaaggataagaaatacaccctgaccatggaggacctggctcct
gctctgtctgagtatggcatcaatgtgaagaagccccactatttcacatag

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