Clupea harengus (Atlantic herring): 122130689
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Entry
122130689 CDS
T09045
Name
(RefSeq) ubiquitin-protein ligase E3A-like isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122130689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122130689
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122130689
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
122130689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
122130689
NCBI-ProteinID:
XP_042561350
UniProt:
A0A8M1KFQ2
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MNSEEKEDCECAPPQAESNPTGGYDRLQEESTFENAEASRMKRAAAKHLIERYYHQLTEG
CGNESCSNDCCASCPSSHRLDNNAAAVKALELYKVNAKLCDPHPSKKGTSSAYLENSSIN
RGGHHNLACGNRKMNHSVREDFKDVNFLTEEKVYEILDICSEKEDYSPLIRVIGRVFSSA
DGLVQSFRHSKQHTKEELKSLQPKDEDKDEDEKEAAACSDSAMEEGGTDLEASSSSRSGE
GGDGQKLGPDEVSVDIEAVRRVYGRLLSNDKVEAAFLNALVYLSPNVECDLTYHNVYSRD
PNYLNLFVIVMENGNLHSPEYLEIALPQFCKAMSKLPLPAQAKLARLWARYPADHIRRMM
ETFQQLITYKVISNEFNSRNLVNDDDAVVASAKCLKIVYFANVLGGDIDTEHNEEDDEEP
MPESSELTLQELLGEERRNKKGPRVDPLETELGARATDCRRPLVPFDEFINEPLNDVLEM
DKDYTFFKVETENKFSFMTCPFILNPVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLN
PYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVE
EIFNPDIGMFAYDESTRLFWFNPSSFENEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRK
LMGKKGTFRDLADSHPVLSQSLKELMEYDGSVEEDMMITFQISQTDLFGNNLMYDLRENG
DKIPVTNSNRKDFVAQYAEYMLNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLIC
GSRQNLDFQALEETTEYDGGYSRDCRIIRDFWETLHSFSEEQKRLFLQFTTGTDRAPVGG
LGKLKMIIAKNGPDTDRLPTSHTCFNVLLLPEYTTTEKLRDRLLKAITYAKGFGML
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaagagaaggaggactgtgagtgtgcgccaccacaggccgaatccaacccc
acaggaggatacgacagattacaagaggagtccacctttgaaaacgctgaagcaagccga
atgaagcgagcagccgccaagcatctcattgaacgctactaccaccagttaactgagggt
tgcggaaacgagtcatgcagcaatgactgctgtgcctcctgtccgagctcccaccgcctg
gacaacaatgcagcggccgtcaaggccctggagctctacaaggtcaacgccaagctgtgc
gacccccacccctccaagaagggcaccagctctgcatacctggagaacagctccatcaac
aggggtggccaccacaacttggcctgtggcaaccgcaagatgaaccactcagttcgggag
gatttcaaagacgtgaacttcctgacggaagagaaggtctatgagatcctggatatctgc
agtgagaaagaagactactccccactcatccgcgtcatcggccgtgtcttctcgagcgcc
gacggcctggtccagagcttccgccactccaagcagcacaccaaggaagagctgaagtca
ctgcagcccaaagacgaggacaaggacgaggacgagaaggaggcggctgcctgctcggac
tccgccatggaggagggcggcacagacctggaggcctcctcatcgtcgcggtcgggcgaa
gggggtgacgggcagaagctgggtccagacgaggtttcggtggacatcgaggctgtgcgg
cgagtctacgggcgcctcttgtccaacgacaaagtggaggcggcctttctgaatgcgctg
gtttacctgtcgcccaacgtagagtgcgacctcacataccacaatgtctactcgcgtgac
cccaactacctgaacctctttgttatcgtcatggagaacggcaacctgcacagcccagag
tacctggagatcgcgctgccacagttctgcaaggccatgagtaagctcccgctcccagca
caggccaagctagcccggctgtgggcacgctacccagctgaccacatccggcgcatgatg
gagaccttccagcagctcatcacctacaaggtcatcagcaacgagttcaacagccgcaac
ctggtcaacgacgacgatgccgtggtggcctccgccaagtgcttgaagattgtctacttt
gcaaacgtgctaggaggtgacatagacacggaacacaacgaggaggatgacgaggagccc
atgccggagtcgagcgagctgactctgcaggagctgctgggcgaggagcggcgcaacaag
aagggcccgcgcgtggacccactggagacggagctgggcgcacgcgccaccgactgccgc
cggccgctcgtccccttcgatgagttcattaacgagccgctcaacgacgtgctggagatg
gacaaggactacacctttttcaaggtggagacggagaacaagttctccttcatgacgtgt
ccattcatcctcaaccccgtcaccaagaacctgggtctgtactacgacaaccgcatccgc
atgtacagtgagcggcgcatcactgtgctctacagcctggtccaggggcagcagctcaac
ccctacctccggttaaaagtgcggcgagaccacatcatcgacgacgcgctggtcagactt
gagatgattgccatggagaatcctgcagacttgaagaagcagctgtatgtggagtttgaa
ggagagcaaggtgtcgacgaggggggggtgtccaaagagttcttccagctggtggtggag
gagatcttcaacccagatatcggaatgttcgcgtatgacgaaagcacaaggcttttttgg
ttcaacccgtcgtcatttgaaaatgagggccagttcacccttatcggcatcgtcctgggc
ctagccatctacaacaactgcatcctggacgttcacttccccatggtggtctacaggaag
ctcatgggaaagaaagggactttccgggatctggcagattcacatccggttctgtctcag
agtttgaaagagctgatggagtatgatggctccgtcgaggaggacatgatgatcaccttc
cagatatcccagacagaccttttcggaaacaacctcatgtacgacttacgagaaaatggt
gacaagatccctgttaccaacagcaacagaaaagactttgtggcccagtatgcagagtac
atgctgaacaagagtgtggagaagcagttcaaagccttcaggagaggtttccacatggtg
accaacgagtcacccctaaagtatttgtttcggcccgaggagattgagctcctcatctgt
ggaagccgacaaaacctagactttcaagcacttgaagagaccacagagtacgacggaggc
tatagtagagattgccgaattattagagacttctgggaaacgttgcactccttcagcgag
gagcagaagaggctatttctgcagttcacaacgggcacagacagagcacctgtaggaggg
ctgggcaaactcaagatgatcatcgccaagaacggacctgacaccgacaggttacccacg
tcccacacctgcttcaacgtgctgctcctgcctgagtacacaaccacggagaagctgcga
gacagactgctgaaagccatcacttacgccaaaggcttcggcatgctctga
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