Clupea harengus (Atlantic herring): 122130764
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Entry
122130764 CDS
T09045
Symbol
chsy1
Name
(RefSeq) chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char01100
Metabolic pathways
Module
char_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122130764 (chsy1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
122130764 (chsy1)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
122130764 (chsy1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
122130764 (chsy1)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
122130764 (chsy1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
122130764
NCBI-ProteinID:
XP_042561459
UniProt:
A0A8M1KI17
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MAGRSRRAWFSVLLGLVVGFTLASRLILPRATELKKAGQKRKASTGGCGIHRGPRKDYGG
GLVWPPQDNGVLATEKPASASSNFLFVGVMTAQKYLDTRVVAAHRTWARTIPGRVEYFSS
EGSDTSLPLPIVALKNVDDSYPPQKKSFMMLKYMHDHYLDQFEWFMRADDDVYIKSNRLE
SFLRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQC
LQEMYTTHEDVEVGRCVHRFAGVQCAWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAIT
LHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMSRLSNTEVRREDLQLGMAPSF
MRFHPRQREDVLEWEFLTGKYIFTSADGQPPRRGMDASQKVALDDIVMQVMEMINANAKT
RGRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKSMTVPVRRHAYLQQTFSKIQF
QEEEEMDAKDLASRINHESDSFSFLSNSLKMLVPFRLGSSGSEQKEPKEEKINILVPLSG
RYEIFVRFMANFEKVCLVPNQNVKLLLLLFTTDNITERVRQVELMREYHVKYPRADMEIK
PVSGPFSRALALEVGSAHFLNDSLLFYCDVDLLFTADFMKRCRDNTKLGEQTYFPIIFSQ
YDPKVVHAGKVPSDNHYVFTTKTGLWRHYGYGIVCVHRGDLMKAGGFDVSIQGWGLEDVD
LFNKFVQSGLKQFRSVDTGIVHVHHPVLCDPNLDPKQYKMCLGSKASSHASTQQLAELWF
EKNDQTFHKLGDNGSSRTE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagaagccgaagagcatggttcagtgttcttttgggactggttgtcggattc
actctggcttccagacttattttgccaagggccaccgagttgaagaaagctggtcaaaaa
cgcaaagcaagcaccggcggctgtgggatacatagaggaccgaggaaagactacggtggt
gggctggtatggccaccccaagataacggtgtgttggcaactgagaagccagcctcggca
tccagcaattttctttttgtcggcgtcatgactgcccagaagtacctggacacccgtgtt
gtagcggcacataggacctgggctcgcaccataccaggccgtgtggagtacttctcaagt
gaaggctcagacactagtctccctttaccaatcgtggccctgaagaacgtggacgactcg
tacccacctcagaagaagtctttcatgatgctcaagtacatgcacgaccactacctggac
caattcgagtggtttatgcgagccgacgacgacgtctacatcaagagcaatcggctggaa
agcttcctgcgcagcctcaacagcagcgaggccatcttcctgggccagacgggcatgggc
gcacgggacgagctgggcaagctggccctggagcctggcgagaacttctgcatgggtggc
ccgggggtgatcatgagccgcgaggtgctgcggcgcatggtgccccacatccgccagtgc
ctgcaggagatgtacaccacacatgaggacgtggaggtgggccgctgcgtgcaccgcttc
gctggggtgcagtgcgcttggtcctatgagatgcagcagcttttctatgagaactatgag
cccaacaagaaaggctacattcgggacctgcacaacagcaaaatccatcgcgccatcact
ctgcaccccaacaagaaccctccttaccagtaccgcctgcacagctacatgttgagcagg
aaaattgctgagttgcgccaccgcaccatccagctgcaccgtgagattgtccagatgagc
cgtctctccaacacagaggtccgccgggaggaccttcagttgggcatggccccgtcgttc
atgcgcttccatccacggcagcgcgaggatgttctggagtgggagttcctgacgggcaag
tacatcttcacctctgcagatggccagccaccacgccggggtatggatgcctcgcaaaag
gtggccctggacgatatcgtcatgcaggtgatggagatgatcaacgccaacgcgaagact
cgcggtcgggtcatcgacttcaaggagatccagtatggataccggcgggtcaatcccatg
tatggagccgagtacgtgctggacctgctgctactctacaagaagcacaagggcaagagc
atgactgtgcctgtccgaaggcacgcttacctgcagcagacctttagcaagatccagttc
caggaggaggaggagatggatgccaaagacctggcgagccgcatcaaccatgaatcagac
tcgttttccttcttgtcaaactccctcaagatgctggtgcccttcaggttgggcagctct
ggctcagagcagaaggagcccaaagaagaaaagatcaacatcctggtgccgctctcaggc
cggtacgagatcttcgtccgcttcatggccaacttcgagaaggtctgcctcgttcccaac
cagaacgtcaagctcctcctcctgctcttcaccacagacaacatcacagagcgcgtgcgg
caggtggagctcatgagagagtatcatgtgaagtacccacgggccgacatggagatcaag
cccgtgtccgggcccttctcccgagctctggccctggaggtcggctctgcccactttctc
aatgactcgctgctcttctactgtgacgtggacctgctgttcactgccgacttcatgaag
cgttgccgggacaacaccaagcttggcgagcaaacttacttcccaatcatcttcagccag
tatgacccgaaagttgtccatgccggaaaggttcctagtgacaaccactatgtttttacc
accaaaacaggcttgtggagacactatggttacggcatcgtgtgtgtacatagaggggac
ctgatgaaagctggtggttttgacgtctccatacagggctggggcctggaggacgtggac
ctcttcaacaagtttgtccagtcaggacttaaacagttccgcagcgttgacactggcatc
gtgcacgttcaccatcctgtattatgtgaccccaacctagaccccaaacagtataaaatg
tgtctgggttccaaggcgtcttcacacgcctcaacacagcagctggctgaactgtggttc
gaaaagaacgatcagactttccacaaactgggagacaatggatcatcgaggacagaatga
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