KEGG   Clupea harengus (Atlantic herring): 122130786
Entry
122130786         CDS       T09045                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04137  Mitophagy - animal
char04140  Autophagy - animal
char04144  Endocytosis
char04145  Phagosome
char04148  Efferocytosis
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122130786
   04145 Phagosome
    122130786
   04140 Autophagy - animal
    122130786
   04137 Mitophagy - animal
    122130786
   04148 Efferocytosis
    122130786
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122130786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    122130786
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    122130786
   04031 GTP-binding proteins [BR:char04031]
    122130786
Membrane trafficking [BR:char04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122130786
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122130786
  Exosomal proteins of other body fluids (saliva and urine)
   122130786
  Exosomal proteins of colorectal cancer cells
   122130786
  Exosomal proteins of bladder cancer cells
   122130786
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122130786
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 G-alpha Septin AAA_7 AAA_16 NTPase_1 AAA_22 AAA_24 AAA_5 MCM ATPase_2 NB-ARC NACHT DAP3 AAA_14 ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 122130786
NCBI-ProteinID: XP_042561482
UniProt: A0A8M1KC61
LinkDB
Position
Unknown
AA seq 224 aa
MRRVASAMLLRSCCSDRMTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA
DFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWR
DEFLIQASPRDPENFPFVVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVE
QAFQTIARNALKQETEVELYNEFPEPIKLDRNERAKPSAETCSC
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcgaagggttgcctcggcaatgctattaagaagctgttgctctgacagaatgacgtct
aggaagaaagttctactcaaagtgatcattctgggagactctggagttgggaagacctcg
ctgatgaatcaatatgtcaataagaagtttagtaatcagtacaaagcaacaataggagct
gatttcctgacgaaagaggtgatggtcgatgaccgactcgtcacaatgcagatatgggat
accgcaggccaggagcgattccagtctctaggagtagcattctaccgcggcgcagactgc
tgtgttctggtgtttgatgtgaccgctccaaacaccttcaagaccctagacagctggaga
gatgagttcctgattcaggccagccctcgtgatccagaaaacttcccttttgtggtgctg
ggcaacaagatagaccttgagaacagacaggtgacaaccaagcgtgcacaagcatggtgc
cagagcaagaacaacatcccctactttgagacaagcgccaaggaagccattaatgtggag
caagcctttcagaccatagcacgcaatgccctaaagcaggaaacagaggtggagttgtac
aacgagttccctgagcctatcaaactggacagaaatgagcgggccaagccttcagcggag
acatgtagctgctaa

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