Clupea harengus (Atlantic herring): 122130815
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Entry
122130815 CDS
T09045
Name
(RefSeq) lissencephaly-1 homolog B-like
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00565
Ether lipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
122130815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
122130815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
122130815
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122130815
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122130815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_EML
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT140_1st
eIF2A
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
DUF7800
Motif
Other DBs
NCBI-GeneID:
122130815
NCBI-ProteinID:
XP_042561519
UniProt:
A0A8M1KI82
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MIWHICNTQKQFIFLFPPLASSYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV
VATKECKAELREHEHVVECISWAPESAHPTILEATGSENKKSGKPGPFLLSGSRDKTIKM
WDVSTGMCLMTLVGHDNWVRGLMFHPGGKFIVSCADDKTLRIWDYKNKRCTKTLSAHEHF
VTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgatttggcacatttgtaatacgcaaaagcagttcattttcctcttccctccgctggct
tctagctactgtgtgaagacgttcacgggccacagggagtgggtgcgcatggtgcggccc
aaccaggacggcacgctgattgccagctgctccaacgaccagacggtgcgcgtgtgggtg
gtggccaccaaagagtgcaaggcggagctgcgggagcacgagcacgtggtggagtgcatc
tcctgggcgccggagagcgcacaccccaccatcctggaggccactggctcagagaacaag
aagagtggcaagcctgggccattcctgctgtctggctccagagacaagactatcaagatg
tgggatgtcagtacgggcatgtgccttatgacactggttggccatgataactgggtgcgc
ggcctcatgttccaccccggcgggaagttcatcgtgagctgtgccgacgacaagacgttg
cgcatctgggactacaaaaacaagcgctgcaccaagaccctgtctgcccatgaacacttt
gtaacctctctggatttccataagacgtctccctatgtggtgaccggaagcgtagatcaa
acagtcaaagtctgggaatgccgctga
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