Clupea harengus (Atlantic herring): 122130870
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Entry
122130870 CDS
T09045
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03250
Viral life cycle - HIV-1
char04144
Endocytosis
char04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122130870 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122130870 (hgs)
04145 Phagocytosis
122130870 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122130870 (hgs)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
122130870 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
FYVE_2
UIM
FYVE_CARP1-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
122130870
NCBI-ProteinID:
XP_042561627
UniProt:
A0A8M1KCK5
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTVHDEVASKQTMEELKDLLKTEPNVRNKILYLIQAWSHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEQLNNSHPSSLSPPPRKSEGKAPSVA
PSELPPEYLTSPLSQQSQVWDPTALPPQMPPKRDEAALQEEEELQLAIALSQSEAEEKER
MRHKGSYGVYPKADPTPVTSSAPPVSTLYSSPVNSSAPSAEEVDPELARYLNRTYWEKKQ
EEVRKSPTPSAPTPVPLPEPIPMPISQPVESQPPVQVQVQPVNIVEQQYQNGESEENHEQ
FLKVLQNAVTTFLNRMKSNHMRGRSITNDSAVLSLFQSINNLHPQLLDILNQLDEKRLYY
EGLQDKLAQVRDARAALNALRDEHREKLRRAAEESERQRQIQLAQKLEIMRQKKQEYLEM
QRQLAIQRLQEQEKERQMRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGVVYQPAG
PPSYPGTFSPAGSVEGSPMHGVYMNQPGQTGGPYQAMPPTDPNMVNAYMYQNAGTNAQAA
PPGQAPPSATPAYSSYQPTPTQGYQNVASQAQSMPPMPQAGPTNGITYMGYQPYNMQNMM
TALPGQDPNMPPQQPYMPGQQPMYQQMAPPGGQQQQAQQQPVQGPPGSAEAQLICFD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggtggtggaacctttgagaggcttctagacaaggccacaagccagcttttg
ctggagacagactgggagtccatcctgcagatctgtgacctcatccgccaaggagacact
caggcaaaatatgcaatcggtgccattaagaagaagctaaatgataagaatccccatgtg
gctctttatgcgcttgaggtgctggaatcagttgtgaagaactgtgggcagacggtccat
gatgaggtggccagcaagcagactatggaggagctcaaagaccttcttaagacggagccg
aatgtcaggaacaagattctctatctgatccaagcctggtcccacgccttccgcaacgag
ccaaagtacaaggtggttcaggacacctaccagatcatgaaggtggagggtcacgtgttc
cctgagttcaaggagagcgatgccatgttcgccgctgagagggccccggactgggtggat
gcagaggagtgccaccgctgcagggttcagttcggagtaatgacacgcaagcaccactgc
agagcctgtgggcagatcttttgtgggaagtgctcctccaagtactcgacaatccccaag
tttggcatcgagaaggaggtgcgagtgtgtgagccctgcttcgagcagctcaacaacagc
cacccctcctccctctctccccctcctaggaaatccgagggcaaggcccccagcgttgca
ccatccgagctgccccccgagtacctgaccagccccctgtcccagcagtcccaggtttgg
gatccgaccgctctacctccacagatgccccccaagcgcgatgaggcagctctgcaggag
gaggaagagctgcagctcgccattgccctgtcccagagcgaggcagaggagaaggagcgc
atgaggcacaagggctcgtacggggtgtacccaaaagccgaccccacccctgtgacctcg
tctgccccacctgtcagcaccctctactcgtctcctgtgaactcctccgccccctcagct
gaagaggtggatcctgagttggcccgctacttgaaccggacctactgggagaagaaacag
gaagaggtgcgcaaaagccccaccccctccgctccaactcctgtgccattgcctgaaccc
atacccatgccaatcagccagcctgtggagagccaaccccctgtgcaggtgcaagtgcag
ccagtcaacatagtggagcagcagtaccagaacggtgagtcagaggagaaccacgagcag
ttcctgaaggtgctgcagaacgccgtcaccaccttcctgaaccgcatgaagagcaaccac
atgcgcgggcgcagcatcaccaacgacagcgccgtgctctcgctcttccagtccatcaac
aacctgcacccacagctgctggacatcctcaaccagttggacgagaagagactatactac
gagggtctgcaggacaagcttgctcaggtgcgagatgcgcgtgcggccctgaacgccctg
cgagacgagcaccgcgagaaactccggcgcgccgccgaggaatccgagaggcagaggcag
atccagctggcccagaaactagagatcatgaggcagaagaaacaggagtacctggagatg
cagcggcagctggccatccagcggctgcaggagcaggagaaggagaggcagatgcgtctg
gagcagcagaagcacaccatccagatgagggctcagatgccggccttctccctgccttac
gcacagatgcagtcactgccccctaacgtggcaggaggggtggtgtaccagcccgccggc
ccgcccagttaccccggcaccttcagccctgctggctcagtcgagggctctcccatgcac
ggagtctacatgaaccagcccggccagacgggcggcccctaccaggccatgccccctaca
gatcccaacatggtgaatgcctacatgtaccagaatgcaggcaccaacgcccaagctgca
cccccaggccaggcccccccctccgccacccctgcctactccagctaccagcccaccccg
acacagggctaccagaacgtggcgtcccaagcccagagcatgccccccatgcctcaggct
ggacccactaacggcatcacctacatgggctatcagccttacaacatgcagaacatgatg
actgctctgccaggacaggacccaaacatgcccccacagcaaccttacatgcccggacag
cagcccatgtatcagcagatggcgccccccggtggtcaacagcagcaggcgcaacagcag
cctgttcagggccccccaggcagtgcagaggcccagctcatctgctttgactga
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