KEGG   Clupea harengus (Atlantic herring): 122130999
Entry
122130999         CDS       T09045                                 
Symbol
sprtn
Name
(RefSeq) DNA-dependent metalloprotease SPRTN isoform X1
  KO
K24051  SprT-like domain-contaning protein Spartan
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    122130999 (sprtn)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    122130999 (sprtn)
SSDB
Motif
Pfam: SprT-like SPRTN_ZBD zf-WRNIP1_ubi zf_UBZ
Other DBs
NCBI-GeneID: 122130999
NCBI-ProteinID: XP_042561829
UniProt: A0A8M1KJ50
LinkDB
Position
Unknown
AA seq 573 aa
MADKDFLLALQLQEQFDFEASTSTDDYFQLCEPSSDVIPYSRPKTVSPERPMSIVDESWE
TIDPSPDVRSMFLEFNDMFFLGKLSGVEVKWSTRMTLCAGVCSYEGRGGLCSIRLSEPLL
KLRPRRDLVQTLLHEMIHALLFVTQNNRDRDGHGPEFCKHMDRINQATGTKITVYHSFHE
EVDVYRQHWWRCNGPCQNRKPYLGYVKRAMNRAPSPRDPWWNDHQRTCGGTYMKIKEPEG
YGKKGKNDNKDKDNKLQKKPTGGTKLPNSTFASGSQDIRKIIAFSGQGFVLGGSSQTSSS
TQKPPWQSPSNPVHIPPKPQVSPPSQSPEMKEISYGQSQISFKKPSTSTVTSAVKKSIAN
HKAFVNINGSPIAKTNVKQSNKKLTDRFKTQLVFQDIFGDVPSPKKTVNVSEASSKTSTP
FSNNANMHGKPSSLVSKVATRPVSDGRPSTSRLFDRPQTSNAGGSKLGSVDPNKPRLLKS
PQKSANTTPGSRKRPLDDDTSSPIYKFFKPSSSPHKKSEPQSQVGSLAPPVRQAAVQQST
PVSMDRIMVNCPVCHTKMPEVEVNNHLDSCLSG
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggcagacaaggattttctacttgcccttcagttacaagagcaattcgatttcgaagcg
tcaacatcaactgatgattatttccagctatgtgaaccttccagcgatgtaattccttac
tcgcgtccaaaaactgtgtcgcccgaaagacccatgtcaattgtagacgagtcgtgggaa
acgattgacccaagccctgacgtgcgatctatgttccttgaatttaatgacatgtttttt
ttgggaaagctcagtggagtggaagtcaaatggagcactcgaatgacactatgtgctggt
gtgtgttcctacgaaggacggggtggtctgtgctccattcgtctcagtgaaccacttctg
aaactccggccacgtcgagacctagttcagacacttttacatgagatgatccatgctttg
ctctttgtgacccaaaacaaccgggaccgtgatggacatgggccagagttctgcaagcac
atggatagaatcaaccaagccactgggacaaaaatcacagtttaccatagcttccatgaa
gaagttgatgtgtaccgtcaacactggtggcgctgtaatggcccttgtcagaaccgaaag
ccctacttaggctacgtaaagagagcaatgaaccgcgctccctcccccagggacccctgg
tggaacgaccaccagcgcacctgtgggggcacctacatgaagatcaaagaaccagagggc
tatgggaagaagggcaaaaatgataacaaggataaggacaacaagcttcagaagaagccc
actggtggaaccaagctgcctaacagtacttttgcatctggatcacaagacatcagaaag
atcattgcattcagtgggcaaggctttgtgcttggaggaagctcacagacatcaagctct
actcagaaacctccctggcaaagtccctcaaaccctgttcacattcctcccaaaccacag
gtgtcgcctccaagtcagtctcctgaaatgaaagaaatcagctatgggcaaagtcagatt
agttttaaaaagccgagcaccagcactgtgaccagtgcagttaagaaatcaatagccaat
cataaagcctttgtcaacattaatggctcaccaattgccaaaaccaatgtcaaacagtca
aacaagaaactgacagatcgtttcaagactcaacttgtatttcaagacatctttggtgat
gtgccatcacctaaaaagactgttaatgtttcagaagcatcttctaaaaccagcacacca
ttcagtaataatgctaacatgcatggtaaacccagcagtttggtctcaaaggttgcaaca
cggccagtgtcagatggaagaccctcaacgtcaaggctttttgatagacctcaaactagt
aatgcaggagggtccaaactgggctctgtggatccaaataagccacggcttctcaaaagt
ccccagaagtcagctaacacaactccaggctccaggaaaagaccactggatgatgatact
tcttcacccatctacaaattctttaagccgtcttcttctccgcacaagaaaagtgaacca
cagagccaggttggctcactagctccacctgtaaggcaagctgcagtacagcagagtact
cctgttagcatggaccggatcatggtcaactgccctgtgtgccacaccaaaatgcctgaa
gtagaagtcaataaccatctagactcttgtctctcaggttga

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