Clupea harengus (Atlantic herring): 122131007
Help
Entry
122131007 CDS
T09045
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
char04517
IgSF CAM signaling
char04530
Tight junction
char04810
Regulation of actin cytoskeleton
char05100
Bacterial invasion of epithelial cells
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122131007 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122131007 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
122131007 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122131007 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122131007 (zgc:86896)
05100 Bacterial invasion of epithelial cells
122131007 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122131007 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
122131007 (zgc:86896)
Membrane trafficking [BR:
char04131
]
Others
Actin-binding proteins
Arp2/3 complex
122131007 (zgc:86896)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122131007 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Rax2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
122131007
NCBI-ProteinID:
XP_042561839
UniProt:
A0A8M1KJ61
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MSLYNFGLEPLSCHAWNKDRTQIAVSPNSSVAYIYQKNGKEWSKIHELTEHSGRITGIDW
AAESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI
SVCYFEKENDWWLSKHIKKPISSTVLSLDWHPNNILLAAGSADLHCRVFSAYIKDIEDKP
GPTPWGAKMPFGEVLLEHKDCGGWVHSVCFSPSGDSLAWVSHNSSISVADAPQGKEVTQL
TTDHLPLTSVLHVNETEIVAAGHDCCPYQFSYKGPGELEFVKKLDIPKQTSKSSVSAMQH
FRNLDKKATTEEDDSELGTLHQNSITQLQIVEGAKSKVEKFSSVGLDGAMVLWTFKH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctacaactttgggttagagccgttgtcctgtcacgcctggaacaaagacaga
acgcaaattgcggtgagtcctaatagcagtgtggcgtacatttaccagaagaacggcaag
gagtggagtaagattcatgagctaactgaacacagtgggcgtatcacaggtatcgactgg
gccgcggagtccaaccgcattgtgacttgtgcttcggacaggaacgcctacgtgtggacc
ctaaaggatggggtctggaagcccactctggttctggtccgtattaaccgggccgccaca
tgtgtcaagtggtctcctctggaaaacaagtttgccctgggaagcggggctaagcttatc
tctgtgtgttactttgagaaagagaatgactggtggctcagcaagcacattaagaagccc
atcagctccacggtcctgagtcttgactggcatcccaacaacatcctactggccgctggc
tcagctgatctccattgcagggtgttctcagcctacatcaaagacattgaggacaagcct
ggacccaccccttggggagcgaagatgcctttcggggaggtgctgctggagcacaaagac
tgcggaggttgggtgcacagtgtgtgcttctccccctcaggagacagcttggcctgggtt
agccacaacagcagcattagcgtggccgacgccccacaaggaaaagaggtcacacagctg
accaccgaccatctaccattgacgagtgtgcttcacgtgaatgagactgaaatcgtggcc
gcgggtcatgactgttgcccttaccagttctcgtacaagggaccaggggagctggagttc
gtgaagaagctggacatcccgaagcagacctccaagagcagcgtgtcagccatgcagcac
ttccgcaacctggacaagaaagcaacgactgaggaggatgacagtgagctgggcaccttg
caccagaacagcattacgcagctgcaaattgtggagggagcgaagtctaaagtggagaaa
tttagtagtgttggcctggatggagccatggtactctggaccttcaagcactga
DBGET
integrated database retrieval system
