Clupea harengus (Atlantic herring): 122131130
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Entry
122131130 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122131130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
PAS_GdpP
Motif
Other DBs
NCBI-GeneID:
122131130
NCBI-ProteinID:
XP_042561982
UniProt:
A0A8M1KDK9
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSFWAHVSVGGSVCDYGDVGEWRNAPYCSKHVPDTSDHTGWGEQEDPLHRHSETPLKGGI
VAMKEPVCLIDNGTDGRLRVQQRSLQILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGTQT
GFALGSTIESKTKGIWMWCVPHPNKAGHTLVLLDTEGLGDVEKGDEKHDTWIFCLALLLS
STLVYNSLGTIDNNALEKLQFVAELTEHIKVKSSEHDRKTELMLVFPSFVWTVRDFTLEL
ELKGKPITADEYLENALKLKPVETGSSPEVLKHNKLRQNLRDFFAVRRCFVMERPASGKD
MKRMEQLRDSDLESSFVQQAKAFCSYIHHSAQVKAMRGGRGLNGRMLGSLAETYVEAIRS
GKVPCLESAVESLAAIQNGRAITEALKFYRAEMERKVKFPTETQEALSMIHTAAEKLAIS
IFINESFNDQDHKYQQQLVTDMAKEYGELCKKNVKVSREVCRSVISQAFASLEKALNNGS
YMRSGGYEDFRCELDRGAQLYRSEKRKGVMSEEVLTKYLEEKNVVGKTIRAADRSLTEAQ
KKMEEDKVRRKEAEQQQKLLVQRNRLQQQAMWDLDRSNEENIRQLEVKMEGERVRAQAEL
ERVVTAKLKEQRELLECGYKRRAQDMEEDIRKLQTDQKKAQEKKKSPSFWGKVAGFFGF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctgggcacacgtgtccgtaggtggcagtgtgtgtgactatggggatgtgggg
gagtggagaaacgccccctactgttccaaacacgtccctgacacctctgatcacactggc
tggggggagcaggaggaccctctacatagacactccgaaacaccactcaaaggaggcatt
gttgccatgaaggagccggtgtgtctgattgataatgggacagacgggcgcttgcgtgtc
cagcagaggtcgctacagatcctggagcagatccagcagccggtggtggtggtggctgtg
gtggggctctaccgcacggggaagtcttacctcatgaaccggctggctgggacacaaaca
ggctttgctttgggcagcaccatcgagtccaagaccaagggcatctggatgtggtgtgtg
cctcaccccaataaagcaggtcacaccctggtgctgctggacacagaggggctgggagac
gtggaaaagggcgatgagaaacacgacacctggatcttctgtctggctctcctactcagc
agcactctggtctacaacagcttgggcaccatcgacaacaatgccctggaaaaactgcag
tttgttgctgaactgacggagcacatcaaggtaaagtccagtgagcatgaccggaagaca
gaactgatgctggttttcccctccttcgtgtggacggtcagagactttactctggagctg
gagctgaagggcaaacccatcactgccgatgagtacctggagaacgccctgaagctgaaa
ccagtcgaaacaggctcctccccggaagttcttaagcacaataagttgcggcagaatctg
agggacttctttgctgtgcggcgctgcttcgtgatggaacgtccagccagcggcaaagac
atgaaacgcatggagcagctgagggactctgacctggagtccagctttgtgcagcaggca
aaggcgttctgcagctacatccaccacagcgcccaggtcaaggccatgagaggaggccgg
gggctgaacggcaggatgctgggcagcctggcagagacgtatgtggaggcgatccgcagt
gggaaggtgccctgtctggagagcgctgtggagtcgctggcggcgatacagaacggccgg
gccatcacagaggctctgaagttctaccgggcggagatggagcgcaaagtgaagttcccc
acagagactcaggaggcgctgtctatgattcacactgctgcagagaaactggccatcagc
attttcatcaatgaatcattcaatgaccaggaccacaaataccagcagcagcttgtgaca
gacatggcgaaagagtatggggagttgtgtaagaagaatgtaaaagtgtctcgtgaggtg
tgccggtcagtcatctctcaggcgtttgcctctctggagaaagctctgaacaacggctcc
tacatgaggtctgggggctatgaagactttcgctgtgaactcgacagaggagctcaactc
tacagatcagaaaaacgcaagggagtcatgagtgaggaggtcctgacaaagtatctggag
gagaagaacgtagttgggaagaccatccgtgctgctgaccgctcgctaactgaagcccaa
aagaagatggaagaggacaaggtaaggcggaaggaagccgagcagcagcagaaacttctg
gtacagcgtaacaggctccagcagcaagccatgtgggacctggatagaagcaatgaggag
aacatcaggcagttggaggtgaagatggagggggaaagagtgagagcccaggcagagctg
gagcgggttgtaaccgctaaactcaaggagcagcgggaactactggagtgtggctataag
aggcgtgctcaggacatggaggaggacatcagaaagctacagacagatcagaagaaagcg
caggagaagaagaagagcccgtccttctggggaaaggtggccggtttttttggcttctag
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