Clupea harengus (Atlantic herring): 122131190
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Entry
122131190 CDS
T09045
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122131190 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122131190 (ube3b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122131190 (ube3b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
122131190 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
122131190
NCBI-ProteinID:
XP_042562027
UniProt:
A0A8M1KDQ2
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MFTATQTSKTQFLEQARQAREERKGYKEKERAATLMQALVRRFLCRCALQKQIRQEVDEF
FVAAETGTTKRNALSIFKIARKLLFICGKDDKLRFEKLCRAILSSMEADNEPKVWYVSLA
LSKDLTIPWLKQIKDVLWMCCEFLKKLKPDIMLDSKLVTLHLTMLITFTDTATWKIVKGK
GEQFKLALNRMCENIMGHLNQKGFYSVLQILLTNGLARSRPSLTKSMLTAVFTLSLRPVL
AAHFSDNLLRSFLIHIMSVPAVVSHLNTLTPECMATMQTHDLLRKFILFLSREEQCLDIC
VCLEGSHTLCLLGNLIHLGFLSEKVLEDEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTRQLQYLWGVPVIRTLFWDVLSKKLEAQEPTPPPQPPPTT
SQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSVEVQKVCSICVLYQTALTTLTQIRL
QILTGLTYLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHL
ITILDDIEVYEEQISFKIEELVTISSFLNTFVYKLVWDGILENAKGEKLDLFHSVHGWLM
VLYERDCRRRFSPDDHWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHIIPHKNRVLLFRN
IVTKEKETLGLVETSQASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLG
VDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSNIHEYHLQLFEFVG
KMLGKAMYEGIVVDVPFASFFLSQVMGHHHSVFYSSIDELPSLDSEFYKNLTSIKRYDGD
VSDLGLTLSYDEEVMGQLVCHELIPGGKTMCVTNENKISYIHLMAHFRMHTQIKEQTAAF
IRGFRCIINPEWLHMFSTPEVQRLVSGDNAEMDLDDLKKHTVYYGGFHSSHRVIIWLWDI
LSSDFTPEEKAMFLKFVTSCSRSPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF
TIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgcaacccagacctccaagacccagttcttggaacaagccaggcaggcgagg
gaggagaggaaagggtacaaggagaaggagagggccgccactctcatgcaggcactggtc
aggaggtttctctgtcgctgtgcactgcagaagcaaatcaggcaagaagttgatgagttt
ttcgtagctgctgaaacgggcacaacgaagagaaatgcattgtccatatttaagattgca
cgaaagttgctattcatctgtggcaaagatgacaaattgcgctttgagaagctttgccgt
gccattctcagcagcatggaagctgacaatgaacccaaggtgtggtatgtgtccttggcc
ctgtctaaagacctgaccatcccgtggctcaaacagattaaagatgtcctgtggatgtgc
tgtgagttcctcaaaaagttaaagcctgacataatgctggacagtaagttggtgacacta
cacctcactatgctcatcacgttcactgacaccgctacttggaagatagtgaaaggaaaa
ggagagcaattcaaactggccttgaatagaatgtgtgaaaacatcatgggccatctcaac
caaaagggattttactctgtgctgcagattttgctcacaaatggattggcaagatccagg
ccctcactgaccaagagcatgttaacagccgtcttcaccctctcgctcagacctgtcctt
gctgcgcacttctctgataacttgctgaggtccttcctcatccacatcatgtccgttcca
gcagtggtctctcacctcaacacactaacccctgagtgtatggccaccatgcagacccat
gacctcctgaggaagttcatcttgttcctgagtcgagaggaacagtgccttgacatctgt
gtctgcctggagggaagtcacacactgtgcttactaggtaatctcatccacctgggtttc
ctgagcgagaaagtgctggaggacgaggccaaccactttgtgaaggacctgacggacatg
ctctcatactgccagagatacgtgtcacagaagaagtccaacctcacccactggcaccca
gtcctgggctggttctcccaaactgtggattacggcctgaatgagtccatgccactggtg
acacggcagctgcagtatctatggggcgtgccggtcatccgcacgctcttctgggacgtg
ctcagcaagaagctggaggctcaggagcccacccctccccctcaacctccaccaaccacg
tcgcagaataacctgccagtcaagaatctgttcaaacgggcgttccaaaagtccgcgtcg
gtgcggaacatcctgaagccggtcggtgggaagcgcgtggactcggtggaggtgcagaag
gtttgcagcatctgtgtgctgtaccagaccgccctgaccaccctcacccagatccgtctg
cagatcctcaccggcctgacatatctggacgacctgctgcctaagctgtgggccttcatc
tgtgagctgggcccccagggtggcctcaagctcttcatggagtgcctgaacaacgacacg
gaggagtccaagcagctgctcgccatgctcatgctcttctgcgactgctcacgccacctc
atcacgatcctagatgacatcgaagtctacgaggagcagatatcatttaaaatagaagag
ctggtcaccatctcctcgtttctcaacacgtttgtctacaagttggtttgggacggcatc
cttgagaatgctaaaggggagaagctagatctgttccatagcgtccacggctggctgatg
gtcctttacgagcgagactgtagacgcaggttctctccagatgaccactggctccgcaag
gacctgaagccaagtctgctcttccaggagctggaaaagggcaagagaagagcccagcta
ctgctgcagtacatcccacacatcattcctcacaaaaacagagtgctgctgttccggaac
atagtgacaaaagagaaggagactctgggactggtggagacgagccaggcctcccctcac
gtcacgcacatcaccatccgacggtcacgcatgctggaggatggatacgaccagctcaga
cgccttcctgttaactccatcaaaggagtgatccgtgtgaagtttgtcaatgacctggga
gtggacgaggctggtattgaccaggatggcgtcttcaaggagttcttagaagagatcatc
aaaaaggtcttcaaccctgcactgaaccttttcaagaccaccagcgggaacgagcgtctc
tacccatcccccacgtccaacattcacgagtaccacctgcagctctttgagtttgtgggc
aagatgctgggcaaggccatgtacgagggcatcgtggtggacgtgcccttcgcctccttc
ttcctcagccaggtgatgggccaccaccacagcgtcttctacagctccatcgacgagctg
ccctcgctcgactccgagttctacaagaacctcacctccatcaagcgctatgacggagat
gtaagtgacctggggctgacactatcatatgacgaggaggtgatggggcagttggtttgc
catgagctcattcccggagggaagactatgtgtgtgaccaacgaaaacaagatcagctac
atccacctgatggcacacttccgcatgcacacgcagatcaaggagcagacggcggcgttc
atccggggcttccgctgcatcatcaaccccgagtggctgcacatgttctccacgcccgag
gtgcagcgcctcgtctccggggacaacgccgagatggacctggacgacctcaagaaacac
acagtttattatggaggtttccacagcagtcatcgtgtgatcatctggctgtgggacatc
ctctccagtgacttcacccctgaggagaaggccatgtttctcaagtttgtcaccagttgt
tccaggtccccactgctgggctttgcctacctcaagccccccttctccatccgctgtgtg
gaggtgtctgatgatcaggacacgggggacactctgggcagcgtgctgcggggcttcttc
accatccgcaagaaggagccgggcggccggctgcccacctcctccacctgcttcaacctg
ctcaagctgcccaactacagcaagaagagcatcctgcgcgacaagctgcgctatgccatc
agcatgaatacaggcttcgagctctcctaa
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