Clupea harengus (Atlantic herring): 122131276
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Entry
122131276 CDS
T09045
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122131276
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122131276
04082 Neuroactive ligand signaling
122131276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
122131276
Ion channels [BR:
char04040
]
Ligand-gated channels
Glutamate (ionotropic)
122131276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122131276
NCBI-ProteinID:
XP_042562080
UniProt:
A0A8M1KHR5
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSPSVWVMMFVMLL
LVTAIAVFMFEFISPLGFNRNLAQGKDPHGPSFTVGKAIWLLWGLVFNNSVPVQNPRGTT
SKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQSPYSFSPPFRFGTVP
NGSTERNIRKNYPDMHQYMVKYHQGGVQDALVSLKTGKLDAFIYDAAVLNYMAGRDDGCK
LVTIGSGYVFATTGYGIALQKGSYWKRQVDLAILGIIGDGEMEELEAQWLTGICHHEKNE
VMSSQLDVDNMAGVFYMLAAAMGLALITFVWEHLFYWRLRFCLTGRCSGQPGLLFTISRG
IWSCIHGVHIELKKPPELGFSPQQNMLHLFKSAKELAAPGGRQGNPSVPQAPPGLFQIMG
VAKGNSLGVAKDTVYSNTGSLLSNRLKEPLNNASLLPGQRAALTLPDAPMHNVTGGGGGG
VGGGEKGVSNASKPRALWKKSVETLRQGAPPPSSEDPPSAAPAAVSMATPPNAAQQLESR
LPMKTQRYLPEEAPDLSTAEGKGHAGVTSGNGGNKPAKEPTLRKRGCRLPRDLSDLELST
LRSQQSGSIQSNHTTTSLHHLFSQGSQSSQGGGGGGGGGSVFTIDSSLDQEPAAALHFPD
LFSDHHHHHHRDNGSSSKNPPMHTQQPILQLNSSLLTSLPPHLGHTPHHPDVMATAAAAK
DKKYNTYGKPGLGGGVSGGGGTGGGALTHCRSCLSRVGGSSSSGGGGYSGLYTVRSPPLR
CDACLHSASLYDISEDHLQHLPDLPPQMPPQMPPQSPSFTAYLPQSDPAQLQEGGALISH
FQTEAPIIPRQHSYENLPQQGGSRRVSLQEASPYANLPAQGCCVPPTTSPMAAAPPGGGG
GGPGLAGVSGLGVGRRSKSLYPLCPSENPFLQTLRDDRRLAHGHSSTDIYKQLVPLTLGH
AAAPAHATTLLASELFYPEHMMPYVAPPPPQGTYPAPRAMSAGGARRVYKRMPSIESDV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggggtctctgaccataaacgaagaacgctctgaggtcatcgacttctccgtg
cctttcgtcgagacaggcatcagcgtcatggtatcccgtagcaacggaacagtctcaccc
tctgcatttctggagcccttcagtccttccgtgtgggtgatgatgtttgtgatgctgctc
ctcgtcacggcgatagcagtgttcatgtttgagttcatcagtccgcttggcttcaatcgc
aacctcgcccagggcaaagaccctcatggtccatcgttcaccgtgggaaaggccatttgg
cttctgtggggcttggtgttcaataactccgtgccggtgcagaaccctcggggaaccacc
agtaagttcatcgtgtcggtgtgggccttctttgccgtcatcttcctcgccagctacacc
gccaacctggccgccttcatgatccaggaggagtttgtggaccaggtcaccgggctcagc
gacaagaagttccagagcccgtactccttctcccctccgttccgcttcgggacagttccc
aacgggagcaccgagagaaacatccggaagaactaccccgacatgcaccagtacatggtc
aagtaccaccaagggggcgttcaggacgcgctcgtcagcctcaagactgggaagctggac
gcgttcatctatgacgcggcggtgctgaactacatggcgggccgagacgacggctgtaag
ctggtcaccatcgggagcggctacgtcttcgccacgacgggatatggcatcgccctgcag
aagggctcctactggaaacgccaggtggacctggccatcctgggcatcatcggagacggt
gagatggaggagctggaggcccagtggctgacgggtatctgtcaccacgagaagaacgag
gtgatgagctcgcagctggacgtggacaacatggcaggcgtgttctacatgctggcggcg
gccatggggctggccctcatcaccttcgtgtgggagcacctcttctactggaggctccgc
ttctgcctcacgggccgctgctccgggcagcctggcctgctcttcaccatcagcaggggt
atatggagttgtatccacggcgtgcacatcgagctgaagaagcctccggagctgggcttc
agtccccagcagaacatgctgcacctgttcaagtcggccaaggagctggcggcccccggt
ggtcgccagggcaaccccagtgttccacaggccccccctgggctgttccagatcatgggc
gtcgccaagggcaacagcctgggcgtcgccaaggacaccgtgtacagcaacaccggcagc
ctgctgagcaaccgcctcaaggagccgctcaacaacgcctccctgttgccgggacaacga
gcagcgctgaccctgcccgacgccccaatgcacaacgtgaccgggggaggagggggcggg
gtcggaggcggagagaagggcgtgtccaacgcctccaagccgcgcgcactctggaagaag
tcagtggagacgctccggcaaggagccccgccgcccagctccgaggacccgccttccgcc
gcccccgccgccgtatccatggcaacgccccccaacgccgcacaacagctagagtcccgc
ctgccgatgaagacccagcgttacctgcccgaggaggcgcccgacctctctaccgcagag
ggcaaaggtcacgccggcgtcacctccggcaacggcggtaacaagcctgcgaaagagccg
acgctgcgcaaacgcggctgccgccttccacgcgacctgagcgacctggagctctcgacc
ctccgcagccagcagagcggcagcatccagagcaaccacaccaccacctcgctgcaccac
ctgttcagccagggcagccagagcagccaggggggaggaggaggaggaggaggagggtct
gtcttcaccatcgactcctccctcgaccaggagcccgccgccgcgctacacttccccgac
ctgttcagcgaccaccaccaccaccatcaccgcgacaacggcagcagcagcaagaacccg
cccatgcacacccagcagccaatcctgcagctgaacagcagcctgctcaccagcttaccg
ccgcacctaggccacaccccccaccacccggacgtcatggcaacagcagcagccgccaaa
gacaagaaatacaacacctacggaaaaccaggactgggcggaggagtctctggtggagga
gggaccggaggcggagctctgacacactgccgcagctgcctgtcccgtgtgggggggtcg
tcgtcctctgggggggggggctactcagggctgtacacggtgcgctcgccgcccctgcgc
tgcgacgcctgcctccactcggccagcctctacgacatcagcgaggatcacctgcagcac
ctgcccgacctgccgccccagatgccgccccagatgccaccccagtcgccctccttcacc
gcctacctgccccagagcgaccctgcccagctgcaggagggcggcgccctgatcagccac
ttccagacggaggcgcccatcatcccccggcagcactcctatgagaacctgccccagcag
gggggctcccggcgcgtgagcctgcaggaggccagcccgtacgccaacctgcccgcccag
ggctgctgcgtgccccccaccacctcccccatggcagcagcgccccccggcggcggtggt
ggtggcccggggctggccggcgtcagcgggctgggggtcggccgccggagtaagtcgctg
taccccctgtgcccctcggagaacccgttcctgcagacgctgcgggacgaccggcggctg
gcgcacgggcacagctccacagacatctacaagcagctggtgcccctcacactaggccac
gccgccgcgcccgcgcacgccaccacgctgctcgcctcggagctcttctacccagagcac
atgatgccctacgtggctccgcccccaccgcagggtacctaccccgcgcccagggccatg
agtgccggcggcgccaggcgggtctacaagaggatgccaagcatcgagtctgacgtctag
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