Clupea harengus (Atlantic herring): 122131733
Help
Entry
122131733 CDS
T09045
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
122131733
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122131733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
zf-U1
Motif
Other DBs
NCBI-GeneID:
122131733
NCBI-ProteinID:
XP_042562324
UniProt:
A0A8M1KKM3
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MGSSGAGGGGALGTSVPSPAQASAAGTANSSYLKPVSMANSASAAVQGKSPAASSLPANA
STVKKANTPKINFVAGNKLQTTSVKADDAKAETAKPAPASLAAQSPDMKMETSDSLAAQS
ALAALQSDVQPVGHDYVEEVRNDEGRVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKK
KVNPELQVEVKPSIRARKIQEEKMRKQLQKEEYWRRREEEERWRMEMSAIYCPRRYEEDM
YWRRMDEDHHWDDRRRMPDGGYPQGPPGPPGLLGVRPGMPIPQPQGPVPLRRPDTSDDRY
VMTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDKAKEEDKEKEKEEKEKEKKK
DTTKDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKTLLTRIVEHLPKQLTLVTP
DKYEVKGSIQEAAIILNSGAEPKMQVTITLTSPIIREENARDGDVTSGMVKDPADVLDRQ
KCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSAFPSWAMELLVEKAISS
ASGPLSPGDALRRVFECISSGILLPGGPGLIDPCEKNPTDTLAAMEEQQREDITSSAQFA
LRLLAFRQIYKVLGMDPLPQMNARFNVRNNRKRRRDNSDGTDGFEAEGKKDKKDHEGF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctccggtgcgggcggaggtggtgccctgggaaccagtgtaccctctcctgct
caggcttctgcggcgggcaccgccaactcgtcttacctgaagcctgtcagcatggcgaac
agtgccagtgcggcggtgcaaggcaagagcccggcagccagcagcctgcccgccaatgcc
agcacggtcaagaaggccaacacccccaagatcaatttcgttgcaggaaataagttacag
accacaagtgtcaaggctgatgacgccaaagcggagacggcaaaacccgccccggcctca
ttggctgcacagtccccggacatgaagatggagacctctgattcgctggcggcgcagtcc
gccctggctgccctgcagagtgacgtccaaccagttggacacgactatgttgaggaggta
cgcaatgatgaaggcagggtgatccgctttcattgcaagctgtgcgaatgtagtttcaac
gatccaaacgccaaggagatgcacttgaaaggacgaaggcatcgtctccagtacaagaaa
aaggtcaaccccgaactccaggtggaggtgaagcccagcatccgagcacgcaagatccag
gaggagaagatgagaaagcagctgcagaaggaggagtactggaggaggagagaggaggag
gaacgctggaggatggagatgagtgccatttactgtcccaggcgttatgaggaggacatg
tactggcggcgtatggatgaggatcaccactgggatgatcggcgcaggatgcccgacgga
ggctacccacaggggccccccggccctcccggactcctgggcgtgcggcctggcatgccc
ataccccagccacaggggccagtgcctctccgccggcccgacacctcagacgaccgttac
gtcatgaccaaacacgcggccatctacccctccgaggacgagctgcaggccatccagaag
atcgtgtccatcactgagcgggcgctcaaactcgtctccgacatcatcacggaccaagac
aaggccaaggaggaggacaaggagaaggagaaggaggagaaggagaaggagaagaagaag
gacaccaccaaggacagagctctgaagggtgtgatgagggtcggcgtgttggccaaaggc
ctactgctgcgcggggataagaatgtgaacctggtgctgctgtgctctgagaaacccacc
aagacccttctgacgcgcatcgtggagcaccttcccaagcagctcacgctggtgacacct
gacaagtacgaggtgaagggctctatccaggaggcagccatcatcttgaactccggcgct
gaacccaagatgcaggtgaccatcaccctgacatcgcccatcatccgagaagagaacgcc
cgggacggagatgtaacctcgggtatggtgaaagacccagcggacgtcttggacaggcaa
aaatgccttgacgctctggctgctctacgccacgctaagtggttccaggctagagctaac
ggactccagtcatgtgtcataatcattcgcattctacgggacctgtgtcagcgagtgccc
acatggtctgcctttccaagctgggccatggagctcctggtggagaaggccatcagcagt
gcatctggccccctgagccccggagatgcccttcgcagagtctttgaatgtatttcctcc
ggcatcctgctccctggtggtcctgggttgatcgacccatgtgagaagaatcccacagac
actttggcagccatggaggagcagcagagagaggatataacctcaagtgcccagtttgcc
ctaaggctactcgcgttccgccagatctacaaagttttgggtatggacccactgccccag
atgaacgcccgattcaacgtgcgcaacaaccgcaagcgccgacgtgacaacagcgatggg
acggatggctttgaggcagaggggaagaaagacaagaaggaccatgaaggcttctaa
DBGET
integrated database retrieval system
