Clupea harengus (Atlantic herring): 122131754
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Entry
122131754 CDS
T09045
Name
(RefSeq) sphingomyelin phosphodiesterase 2-like
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122131754
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
122131754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122131754
NCBI-ProteinID:
XP_042562357
UniProt:
A0A8M1KEM4
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MSAQRSVRLRVFSLNCWGIRYLSRSCAQRYEMIAELLDREQHDIALLQEVWSEKDYLFLK
RTLATSHPFTHYFRSGVIGSGLAVFSKHRIQDALLYRYSLNGYPYMIHHGDWFGGKAVGL
VILSVCGMRANVYVTHLHAEYCRAEDTYLPHRTVQAWELINFIRHTSADADLVILGGDLN
MHPQDLGTRLLRAHTGLRDSYAETDTFDGCEDGITLIADNPFTKKKDLLPFEKGIRIDYI
LIKGSNSVCVKCESMSTTKGAVPDKPFPYSDHESLTSQLLLLQQSDRMDGVGERHTDTGT
PLRELVDVVSEARCVVKEGFRQTERLQLMAMCLLAVGLAFLLLPVTTLPWLYPHSHCVVS
YSFLGLLGALGLAMVLSGALLYVLFTTQLKALRGTEASMKLATANLQEREGGCLEEGEED
EGGRVPSSPPHTARGEARSQPTPLGYED
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacagcggtcagtcaggctgcgtgtcttttccctcaactgctggggaatccgc
tacctcagtcgcagctgtgctcagcgctatgagatgattgcagagctgctggacagggag
cagcatgacattgcactgttacaggaggtgtggagtgagaaagactacctcttcttaaaa
aggacactggctacctctcatcctttcacccactactttagaagtggggtcattggtagt
ggactggcagtgttttctaagcacaggattcaagatgccctgctctaccgatattccctc
aatggttatccatatatgatccaccatggggactggtttggaggcaaagcagtgggcctg
gttatcttgagtgtctgcggaatgagagctaatgtctatgtcacacatttgcatgctgag
tactgtagggcagaagacacctaccttccccatagaacagtacaggcttgggagcttatc
aactttatccgtcacacctctgctgatgctgacctggtgattttggggggagacctgaac
atgcacccccaggacctgggcacccgtcttctcagggctcacactggactcagggacagc
tacgctgagacagacacctttgatggttgtgaagatggcattacacttatcgctgataac
cccttcacaaaaaagaaagatctgcttccttttgagaaagggatccgaatcgactacatt
ctaataaagggctctaatagtgtgtgtgtaaaatgtgagtccatgtctaccaccaagggc
gctgtcccagacaagcctttcccctactccgatcatgagtccctcacctcccagctcctc
ctcctccagcagtctgacaggatggatggagtcggggagaggcacactgacacaggcacc
cctctgcgtgagctggtggacgtggtgagcgaggctcgctgtgtggtcaaggagggcttc
cgtcagacggagcgactgcagctgatggctatgtgcctgctggccgtgggcctggccttc
ctgctgctccccgtcaccaccctgccctggctctacccccacagccactgcgtggtctcc
tactccttcctgggtctgctgggggcactgggcctggccatggtgctgagcggcgccctg
ctctacgtcctcttcaccacccagctgaaggccctgcgcgggaccgaggccagcatgaag
ctggccaccgccaaccttcaggagagggaaggagggtgcctggaggaaggggaggaggac
gagggggggagagtgccgtcgtcaccgccgcacacagcacgtggagaggccagatcccag
ccgactccactaggctatgaggactaa
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