KEGG   Clupea harengus (Atlantic herring): 122131763
Entry
122131763         CDS       T09045                                 
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03420  Nucleotide excision repair
char04115  p53 signaling pathway
char04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122131763 (ddb2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122131763 (ddb2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    122131763 (ddb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122131763 (ddb2)
   03400 DNA repair and recombination proteins [BR:char03400]
    122131763 (ddb2)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122131763 (ddb2)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122131763 (ddb2)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML WDR55 Beta-prop_IFT140_1st Beta-prop_WDR75_1st EIF3I Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 122131763
NCBI-ProteinID: XP_042562366
UniProt: A0A8M1KE86
LinkDB
Position
Unknown
AA seq 514 aa
MVFGDKPIVIFRIMARKKTTENIQAKNNNNNASSSGVKKKRKSDTTSETLTKKLKAKKDE
KASGTGNKPPCLKCSGDQKKGNHGSILHYFYKNSLGQSIHSHLRQCLQEPFVRSLASYRV
HSTASPFDRRVTCLEWHPTLPTTLAVGSKGGDIVLWDYNGPNKMSFVQGKGAGDFIGGMK
FCPSDSSRVYAASGDGSLTLQSFQGLPSQTLSRAQDCGHTHHNVCYWYCCVDVSASRQML
ATGDNTGRLVLLGLDGHKIFEDKLHKAKLTHAEFNPRCDWLLATASVDSTVKLWDLRNLK
DKKSFLHEMQHNKPVNSAYFNPTDSSKLLTTDQGDEIRVYASSDWSKPEHIIQHPHRHFQ
HITSIKATWHPIYDLIVAGRYPDDRICVGDVRSVDIFDANTGALECQMLDPNTKGIISLN
KFNPLGDVLASGMGFNVLVWNREDVVNGMQESLLKKRMEENRGQAGTSRTRSRQQRPPRD
KKGTAEDLKLKKKLASLESTETKSKTQRNRKKLD
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggtgtttggtgataaaccaatagtaatttttagaatcatggcaaggaagaaaaccacg
gaaaacattcaagccaagaacaacaacaacaatgcgtcgtcaagcggtgtgaaaaagaaa
cggaaaagcgacaccacaagcgaaacgctcactaagaagctgaaagccaaaaaagatgaa
aaagcctcagggacaggaaacaagccaccttgcctgaagtgttcgggggatcaaaagaag
ggaaaccatgggagcatactgcactacttctacaagaactccctcggccagagcattcac
tcacacctgcgacagtgtctgcaggagccgttcgtgcgctcgctggcctcctacagggtc
cacagcacggccagcccgttcgaccgcagggtcacctgcctagagtggcaccccacgctc
cccaccaccctggctgtgggctccaaggggggagacatcgtactgtgggactacaacgga
cccaacaagatgtcctttgtgcaagggaaaggagcaggtgatttcattggtgggatgaag
ttctgtccgtcggactcgtcgagagtctatgcggcttcgggtgacggttccctgactctg
cagagctttcagggtctcccctcacagaccctctccagagcccaggactgtggccacact
caccataatgtgtgttactggtattgctgcgttgatgtgtccgctagccgccagatgcta
gcaacaggggacaacaccggacgactcgtccttctgggcttggatggccacaagatattt
gaggacaagctacacaaagccaaactgacacatgcagagttcaacccccgctgtgactgg
ctcttggccacggcgtctgtcgacagcactgtcaaactgtgggacctgagaaacctcaag
gacaagaagagctttctgcacgaaatgcagcacaacaaaccagttaactcggcctatttc
aaccccacggacagctcaaagctcctcaccacagaccaaggggatgagatcagggtctac
gcctcgtctgattggtccaagcctgagcacatcattcagcatcctcacaggcatttccag
cacatcacgtccatcaaggccacctggcatccaatatatgacctcatagtagctggccgt
taccctgacgaccgtatctgcgttggtgatgtcaggtcagtggacatcttcgatgccaac
acaggggctctggagtgccagatgctggacccgaacacaaagggcatcatttctttgaac
aagtttaaccccctgggagatgtgctggcctcaggaatgggcttcaatgtcctggtttgg
aacagagaagacgttgtgaatggcatgcaggaaagcctgctgaagaagaggatggaggag
aacagaggccaagctggaacatctagaacgcgaagtcgtcaacagcgccctcccagggac
aaaaagggaactgcagaagatttgaagctgaagaaaaaattggcatcgctggagtcaaca
gagaccaaatccaagacacagaggaacagaaagaaattggattga

DBGET integrated database retrieval system