Clupea harengus (Atlantic herring): 122131795
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Entry
122131795 CDS
T09045
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03060
Protein export
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122131795 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
char02044
]
122131795 (srp54)
Enzymes [BR:
char01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
122131795 (srp54)
Secretion system [BR:
char02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
122131795 (srp54)
Eukaryotic Sec-SRP protein
122131795 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
nSTAND3
NPHP3_N
AAA_17
DUF2209
AAA_33
ResIII
SRPRB
MeaB
AAA_22
AAA
APS_kinase
AAA_30
MobB
AAA_19
Zeta_toxin
nSTAND_NTPase7
AAA_16
PduV-EutP
6PF2K
AAA_18
ATP_bind_1
Thymidylate_kin
AAA_31
Torsin
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
122131795
NCBI-ProteinID:
XP_042562408
UniProt:
A0A8M1KJ89
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
SESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIARVARGAGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagccgacttggggaggaaaataacctcggcgctgagatcactcagcaatgcc
accataatcaacgaagaggttctaaatgctatgttaaaagaagtatgtgctgccttactg
gaagctgatgtaaacattaagctggtgaagcagctcagagaaaatgtcaaagctgctatt
gacctcgaggaaatggcctctggtttgaacaagagacgaatgattcagcatgctgttttt
aaagagcttgtcaagcttgtggatcctggagtcaaggcctggacaccaactaagggaaaa
aataatgttatcatgtttgtaggccttcaaggcagtgggaaaactacaacatgttcaaag
ttggcatactactaccaaagaaaaggttggaaaacatgtctgatctgtgccgacacattc
agagcaggtgcctttgaccagctgaaacagaacgctacaaaagccagaattcccttctat
gggagctacacagagatggatcctgttgtcatagctgctgagggtgttgagaaatttaag
tccgagagttttgaaatcatcattgtagacacaagcggtcgacacaaacaggaagactct
ctctttgaggagatgttgcaggtctccaatgctgtgcaacctgataatattgtgtacgtg
atggatgcatccattggtcaagcttgtgaggcccaagccaaggctttcaaagataaggtg
gatgtggcgtctgtgatcgtgacaaagctggacggtcatgccaaaggaggtggtgcgctt
agtgctgtggccgctaccaagagtcccattatattcattggaactggagaacatattgat
gactttgaacctttcaaaacacaaccttttatcagtaaacttttgggtatgggagatatt
gaaggtttgatagacaaggtgaatgagctgaagctggatgacaacgaagagcttattgac
aagcttaaacatggtcagttcaccctcagagacatgtatgagcagttccaaaacatcatg
aaaatgggtccctttggacagatcatgggcatgattccaggatttggaactgatttcatg
agcaaaggtaatgagcaggagtccatggccaggttaaagaagctgatgaccattatggac
agcatgaatgaccaagagctggacaacaaagatggtgccaagctcttcagcaaacagccc
aacagaattgcgagagttgctcgtggcgcaggtgtagccaccagagatgttcaggagctg
ctcactcaatacactaagtttgcccagatggtgaaaaagatgggtggcatcaaaggcttg
ttcaaaggtggtgatatgtccaagaatgtcaacccatcccagatggcaaagttgaaccaa
cagatggccaagatgatggatcccagagttctacaccacatgggtggtatggcaggactg
cagtccatgatgaggcagtttcagcaaggtgcggctggcaacatgaaaggaatgatggga
ttcaacaacatgtga
DBGET
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