KEGG   Clupea harengus (Atlantic herring): 122131829
Entry
122131829         CDS       T09045                                 
Symbol
trim55b
Name
(RefSeq) tripartite motif-containing protein 55b
  KO
K10654  tripartite motif-containing protein 55
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122131829 (trim55b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122131829 (trim55b)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122131829 (trim55b)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 zf-B_box zf-RING_5 zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_6 Sina_RING Prot_inhib_II Zn_ribbon_FGT1_2 zf-RING_11
Other DBs
NCBI-GeneID: 122131829
NCBI-ProteinID: XP_042562454
UniProt: A0A8M1KL14
LinkDB
Position
Unknown
AA seq 361 aa
MDSLAKELICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPYLPTRSGSLTSGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQQSSSPSQPAPEAKPEQPMCETHKDEKI
NIYCVTCSTPTCSMCKVFGDHKDCEVAPLNSVFQNQKSELTDRIAMMVSSNERVQGVISQ
LEETCKIIEENSRRQKSKVCEKFDQLYAIMEERKREMCLTVSAEQEEKLNYIQGLKQKYT
DHLETMAKVVETGIQTMEEPEMAVFLQTAKPLLKKITEGSDTSHLEKVERGYENMDHYTA
SFLKERKALCGIDFIEDDEEEEEQEEEEGAGTEEEQAVGGASDSGATPLPAQSAIKATAS
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggatagcctggcgaaggaactcatttgtcccatttgtttggagatgttttcaaagcca
gtggtaattcttccatgtcaacacaacctttgccgcaaatgtgctaacgatgtgtttcag
gcatccaacccctacctacccactagaagcggctcgctgacatctggaggccgtttcaga
tgcccatcctgccgacatgaggttgtgttggaccgacatggagtctatgggctgcagagg
aacctcctggtggaaaacatcattgacatgtacaaacaacagtcgagcagccccagccaa
cctgccccggaggcgaaaccagagcagcccatgtgtgagactcacaaggacgagaagatc
aacatctattgcgtgacgtgtagcacccccacctgctccatgtgcaaggtattcggggac
cacaaagactgcgaggtagcccctctcaacagcgtcttccaaaatcagaagtcagagctg
acggacaggatagcgatgatggtgagcagcaatgagagggtccagggcgtcatcagccaa
ctggaggagacctgcaagattatagaggagaacagcaggaggcagaagtccaaggtgtgt
gagaagtttgaccaactctacgccatcatggaggagaggaagagggagatgtgcctgaca
gtgtcggccgagcaggaggagaagctcaactacatccaaggcctgaagcagaagtatact
gatcacctggagaccatggcgaaggtcgtggagacagggattcagacaatggaggagcct
gaaatggctgtgttcttgcagactgcaaaacctcttctgaaaaagatcactgagggctcc
gacacgtcccatctggagaaagtggagcgaggttatgagaacatggatcactacactgcc
agctttctgaaagagagaaaagcactgtgtggcatcgacttcattgaagatgatgaagag
gaggaggagcaggaggaggaagaaggtgctggaacagaggaggagcaagcagtgggagga
gcttcagattcaggagccacgcccctaccagcccagagcgccattaaagccactgcgtcc
tcctag

DBGET integrated database retrieval system