Clupea harengus (Atlantic herring): 122132062
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Entry
122132062 CDS
T09045
Name
(RefSeq) toll-like receptor 13
KO
K18807
toll-like receptor 12
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
122132062
Pattern recognition receptors [BR:
char04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122132062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_LRWD1
LRR_EndoS
LRR_9
Motif
Other DBs
NCBI-GeneID:
122132062
NCBI-ProteinID:
XP_042562759
UniProt:
A0A8M1KLX8
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
NLVALDIVHVKLNKSDFCAGQHRAVSNLTSLNLGKNLLSTIAVYQFSCMPKLEILDLSFN
LIATLEEKAFHGLSHLRILRLTNNKLSRLHTNDFRWLPALEVLDIDENSIGSIEEGVFRK
QKELQELRLGKLDIIYVINFNMIFYAVPPKLRYLSIDAGHGTNLQISPVMSAPNGSLVLH
LNGDLLECRKTCENQFFKAVKVLKVNSQRFSCQNRFMVRYFPNLESFEYHTHIDKVSLRY
TGISTLRHLKRLKLTNLNFAKQTDPAMIFHNLSKLQILVLSNCRFTFLTKSMFQNLTSLR
VLRLYSASPLLLLDGVFDALPSLTIVVFDKVDFRCDCKNSWLLTWAERSIHIQVIYLQRQ
ECVWHYRKLNFLSTMERLCQTDVEYLCYLGTALTISFLMATAVGYNFGRWPFLVLFFRGR
GWLERRIGQRRRRKRRGGLLYEDVEEEEEEEEEEEEEVQFDAFVSFSSRDEAWVLGELAP
RLEEQGEPRLRLCLHNRDFEVGKGIVDNIAESIYKSRRTVCVLSRCYLRSDWCSLELRMA
THRLLAEHKHRLILIFFDRISPFELSAFHRLAKLVRMRTYLDWPQDEAERVQFWERLRRN
IAEGEVDAADGR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
aatttggtggctttagacattgttcacgtgaaactgaataaatcagacttctgcgcaggt
caacatagagcagtttcaaatctcacctctctcaatctgggaaaaaatctactttctaca
atcgcagtttatcagttttcctgtatgcctaaactggagatccttgatttgagttttaat
ctgattgcaacactggaagagaaggcattccatggattatctcatctgcggattttaagg
ctcacaaacaacaagctaagtagactccatactaatgacttcaggtggcttccagctcta
gaggttctagatatagatgagaattcgattggaagtatagaagaaggagtcttccggaaa
cagaaagagctgcaagagctgaggcttggaaagctagatatcatatacgtcataaatttc
aacatgatattttatgcggtaccacctaaactgcgctatctcagtatagatgctggccat
gggacgaaccttcaaataagtccagtaatgagtgctccaaatggttctctcgttcttcat
ctgaacggagacttactggagtgcagaaaaacttgtgaaaatcaattttttaaagcagtc
aaagtgttaaaagtgaacagccaacggttctcctgtcaaaataggttcatggtccgctac
ttccccaatctcgagtcgttcgagtaccacacccacattgacaaagtatctttgcgctac
actgggattagcacactcaggcacctgaaacgccttaaattgaccaacctcaattttgcc
aagcaaacagaccctgcaatgatttttcacaacctctcaaaactgcagatcctggtcctg
agcaactgccgattcactttcctcaccaagagcatgttccagaacctcacctctctgcgt
gtgctgcgtctttacagtgcatcgccactccttctgctagatggagttttcgacgcgctc
ccttcattgaccattgttgttttcgacaaagtagatttccgctgtgactgcaaaaacagc
tggctgttgacatgggcagagagatccatacacattcaggttatctacctccagagacag
gagtgtgtgtggcactataggaagctcaactttttgtcaactatggagcgtctgtgccaa
acagatgtggagtacctctgttaccttggcacagctctcaccatctctttcctcatggct
actgcagtcggctacaatttcggccgttggcctttcctggtgctcttctttcgaggacgt
gggtggctggaaagaagaatcgggcaaaggaggaggaggaagaggagaggaggattgttg
tatgaagatgtggaagaagaggaggaggaggaggaggaggaggaggaggaggtgcagttt
gacgcgtttgtgtctttcagcagccgggatgaagcgtgggtgctgggggaactggctcct
cggctggaagaacagggtgagccaaggctcagactctgcctgcacaacagagactttgag
gtgggtaaaggaatcgtggacaacatcgccgagagcatctacaaaagccggcggacagtc
tgtgtgctcagtcgctgttacttgcgtagcgactggtgctctctggagctgcgcatggcc
acacaccgtctgctggccgagcacaaacacagactcattctcatcttcttcgaccgcatc
tctccctttgagctctcagcatttcaccgactggcgaagctggtgaggatgcgtacgtac
ctggactggccgcaggatgaggcagagcgggtgcagttttgggaacgcctgcgtagaaac
atcgcggagggagaggtggatgctgctgatggcaggtag
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