KEGG   Clupea harengus (Atlantic herring): 122132064
Entry
122132064         CDS       T09045                                 
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03022  Basal transcription factors
char03420  Nucleotide excision repair
char04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122132064
  09124 Replication and repair
   03420 Nucleotide excision repair
    122132064
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122132064
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:char01001]
    122132064
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    122132064
   03019 Messenger RNA biogenesis [BR:char03019]
    122132064
   03400 DNA repair and recombination proteins [BR:char03400]
    122132064
Enzymes [BR:char01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     122132064
    2.7.11.23  [RNA-polymerase]-subunit kinase
     122132064
Protein kinases [BR:char01001]
 Serine/threonine kinases: CMGC group
  CDK family
   122132064
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     122132064
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     122132064
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     122132064
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 Kinase-like ABC1 Haspin_kinase RIO1 APH
Other DBs
NCBI-GeneID: 122132064
NCBI-ProteinID: XP_042562761
UniProt: A0A8M1KFB6
LinkDB
Position
Unknown
AA seq 248 aa
MALDVKSRSKRYEKLAFLGEGQFATVYKARDKTTNSIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHHNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHHHWILHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLTKIFEALGTPTEETWPVR
FYLQQLAR
NT seq 747 nt   +upstreamnt  +downstreamnt
atggcgttggacgtgaagtcaagatccaagcgttatgaaaaactggcttttcttggagag
ggacagtttgccacggtttacaaagccagagataaaacaacaaattctatagtggcaatc
aaaaagatcaaagttgggcacagaacagaagcaaaggatggcattaaccggacagctctt
cgggagattaagttgttgcaggaactgagtcatcataacattataggtctattagatgcg
tttggacacaagtctaacatcagtttggtgtttgattacatggaaacagatctggaggtg
atcataaaagacactagccttgtattaaccccggccaacattaaagcctacatactgatg
acgcttcagggactggagtacatgcaccatcactggatcttacacagggatttaaagcca
aataacttgttgcttgatgaaaatggggtcctgaagctcgctgactttgggttggcaaaa
gctttcggaagtccaaacagggtttacacacatcaagttgtcacacggtggtaccgtgct
cctgagcttctctttggtgccaggatgtatggtgtaggtgtggatatgtgggccgtgggc
tgtatactcgctgagttgcttctcaggttgccattcttggcaggagactccgacctagat
caactgacaaaaatatttgaagcattgggaacaccaacagaagaaacgtggccggtacgt
ttttatttacagcagttggctcgctaa

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