Clupea harengus (Atlantic herring): 122132092
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Entry
122132092 CDS
T09045
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122132092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
122132092
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122132092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122132092
NCBI-ProteinID:
XP_042562799
UniProt:
A0A8M1KM21
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MGTPKGKERKPFILEVDDRTDEERAQSKEQEAKDHWASALRLGPTEKDRSPMDSEYQEDV
GETTPQIKINRNFLKGISGITGEAAQDKDKFDIKRLFTAVSSGEVAQLEGLEQYLRRAMK
YLTDSAYQSKGKTALLKALLNLRDGRNDTVKLLLDITEKMGDLKKFVNAAYTDVYYKGQT
ALHVAIERRSKYFVKLLVEKGADVHAKACGKFFQQHDGPCFYFGELPLSLAACTNQRDIV
DFLLENQYQNADVRETDSQGNMVLHALVLVADNSLENTEFVIKMYDHILAKAAQLYPKVK
LEEIENNQRLTPIKLAANRGKIELFKHMLHREFQDKETRHLSRKFTEWAYGPVYSSLYDL
SSLDTCEKKSVLEIVVYGTEIPNRLEMLQVEPLNQLLEEKWKRFGYPIFLFNFVVYVLYL
SVFSTVAYFRKDGSAGLPPYPLEDTQEDYFLLAGQLILLLASVYFFFKGFSDFRRKRPKL
GTLLIDGFCELLFFIQAVLFLASVALYFCGRMEYLGFMVFCLALSWMNLLYFSRGSKNMG
IYSVMIQKMILGDILRFLFVYMVFLFGFSSAVVTLLDEPETNKTFVPKARFGYVNTDDSN
TCKKPTFKNFYFTTLELFKFTIGMGDLEFTEQYRYKEVFYVLLISYIVLTYILLLNMLIA
LMNKTVEKISEESTSIWRLQRAITILDTERRLPQCLKRRLRSGVEKNLGKGNGEDLRWCF
RVEEVNWNKWNTCLGIIHEDPGSQDFKIPMTPPSRPGRGNVAIILLSNTQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaccaaagggcaaagagaggaagccattcatcctggaagtggatgacaggact
gacgaagagcgtgcacagagcaaagaacaggaagcaaaggatcactgggcatctgctctt
cgactgggtccaactgaaaaagacagaagccctatggactctgaatatcaagaggacgta
ggagagaccactccgcagatcaaaatcaacaggaatttcctcaagggtatcagtggaata
acaggcgaagctgctcaagacaaagacaaattcgacattaaaaggctcttcacagcagtt
tcaagtggagaggttgcccagctagagggactggagcagtatctgcgtcgtgctatgaaa
tacctgactgactctgcctatcagtccaagggcaagactgctttactcaaagctctccta
aacctaagagatggcaggaatgacaccgttaaattgctccttgacatcactgagaagatg
ggtgatttgaagaaatttgtcaatgcggcatatactgatgtttattacaaaggccagact
gcccttcatgtagccattgagagaaggagtaaatactttgttaagcttctggttgagaaa
ggtgctgatgtccatgccaaggcctgtgggaagttctttcagcagcatgatggaccctgc
ttctattttggcgagctaccgctttcgctggcagcctgcaccaaccagagagacatagtt
gacttcctgttggaaaaccagtaccagaatgcagatgtgagggagacagactcacagggt
aacatggttctccatgctctggtgctggtagcagataacagtctggagaacacggaattt
gttattaagatgtatgaccacatcttggccaaagcagcacagctttacccaaaagtcaag
ctggaggagattgagaacaaccaacgcctcacaccaattaaacttgcagccaacagaggc
aagattgagctgtttaaacatatgttacatcgagagttccaggataaagagaccagacat
ctttccagaaagttcactgagtgggcctatgggcctgtctattcctcactgtatgacctg
tcatcactggacacctgtgagaagaaatctgtcctggagatagtcgtttacgggaccgaa
atcccaaatcgtctggagatgcttcaggtggagccactcaatcagctgctggaggagaag
tggaagagatttggttatccaatatttctcttcaattttgtagtttatgtgttgtacctc
tccgtattctccactgtggcctatttcaggaaagacggatcagctggtctgccaccatat
ccgttggaggatacacaagaggattacttcctcctggcagggcaactcatacttctcttg
gcttctgtttacttcttctttaaagggttttcggatttcagaaggaaacgtccaaaactg
ggaactttgttaatagatggcttctgtgaactcctttttttcatccaggcagttctcttc
ctggcatctgtggcactctacttttgtggcaggatggagtaccttgggttcatggtattc
tgtctggctctcagctggatgaacctactctacttctccagaggatccaagaacatgggc
atctacagcgtcatgatacagaagatgattcttggggacattttacgttttctttttgtt
tacatggttttcctctttggattttcatcagcggtagtcactctactggatgaaccagag
acaaacaaaacatttgttcccaaagcgcgttttggatatgtaaacactgatgattcgaac
acttgcaaaaagccaactttcaagaacttctacttcactactctggagctgttcaagttc
accataggcatgggggacctggagttcactgagcagtaccgctacaaggaggtgttctat
gtgcttctcatctcctacatcgtcctcacctacattctgctcctcaacatgctcatcgcc
ctcatgaacaaaactgtggagaagatctcagaggagagcaccagcatctggagactacag
cgagccattaccatcctagatacagaaagacgtctaccacagtgtttgaagcgcagactt
cgttctggagtagagaaaaacctgggcaaggggaatggagaggaccttcgctggtgcttc
agagtggaggaagtcaactggaacaaatggaacacctgcctgggcattatccatgaggat
cctgggagccaagacttcaagataccaatgactcctcctagcagaccagggaggggtaat
gtagcgatcattctcttatcaaacacccagtag
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