Clupea harengus (Atlantic herring): 122132136
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Entry
122132136 CDS
T09045
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122132136 (pparaa)
03320 PPAR signaling pathway
122132136 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
122132136 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
122132136 (pparaa)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122132136 (pparaa)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
122132136 (pparaa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TAFH
Motif
Other DBs
NCBI-GeneID:
122132136
NCBI-ProteinID:
XP_042562866
UniProt:
A0A8M1KFM1
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All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MVDMPSPYSPSSPVGDSVLGSPLCGDLIQDMEELEDLSQSIEEDTFNSFDVHEHKSSSTG
SECSTALDFLTPASSPSSGVCGAGTGSEVSSNPLNLECRVCADRASGFHYGVHACEGCKG
FFRRTIRLKLEYDKCERTCKIQKKNRNKCQYCRFNKCLSVGMSHNAIRFGRMPQSEKLKL
KAELETGEKQYVEPQLADTKALVRQLHEAYLKHFPMNKAKARGFLTGKTSTPPFVIHDLQ
TLQLAENTLLIQLFGGSVEAASLLQREAEGRLFHCSQRTSVETVTELTEFAKAVPGFPEL
HLNDQVTLLKYGVHEAIFALLASCMNKDGLLVAQGRGFITREFLKSLRRPFSDMMEPKFQ
FAVKFNALELDDSDLALFVAAIICCGDRPGLGNGSHIECMQETIIHALRLHLLANHPDCP
FLFPKLLQKLADLRQLVTEHAFLVQEIKKTEDASLHPLLQEIYSDMY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatgccaagcccctacagcccgtcctctcctgtgggagactccgtcctgggc
agtcctctgtgtggggacctgatccaggacatggaggagctggaagatctctctcagtcc
attgaagaggacacgttcaacagctttgatgtccatgaacacaagtcttcaagtacagga
tcagagtgttccactgcactagattttctaacaccagcgtccagcccatcctctggggtg
tgtggtgcagggacaggaagtgaggtttcctcgaaccctctaaacctggagtgtcgtgtt
tgtgctgatcgtgcgtcaggattccactatggggtgcacgcatgtgagggatgcaaggga
ttcttcaggaggaccatacgcctcaagttagagtatgacaaatgcgagcgaacttgcaag
atccagaagaaaaaccgtaacaagtgtcagtactgccgattcaacaagtgcctgtcagtt
ggcatgtcccacaatgccatccgttttgggcgtatgccccaatcagagaagctgaaattg
aaagctgagctagagacgggagagaagcagtacgtggagcctcagctggccgataccaag
gctctagttcggcagctccacgaggcttacttgaagcacttccccatgaataaagccaaa
gccagaggctttctgactggcaagaccagtacaccgccttttgtcatccatgacttgcag
actctgcagctggcagagaacacgttgctgatccagctgtttggaggcagtgtagaggct
gccagccttctgcagcgcgaggccgagggccggctcttccactgcagccagcgcacgtcc
gtggagacggtgaccgagctcaccgagtttgccaaggcagtgccaggcttcccggagctc
cacctgaatgatcaggtgaccttgctgaagtacggcgtacacgaggcaatctttgctctg
ctggcctcctgcatgaacaaggacgggctgctggtggcacagggccgcggcttcatcacc
cgtgagttcctcaagagcttgcgccggccttttagcgacatgatggagcccaagttccag
ttcgccgtgaagttcaacgccctggagctggatgacagtgacctggctttatttgtggct
gccatcatctgttgtggagacagaccaggcctggggaacgggtctcatattgagtgcatg
caggagactattattcatgcactgaggctccatctactggccaaccacccagattgccca
ttccttttccccaagctgttgcagaaactggccgaccttaggcagcttgtgaccgagcat
gcttttctagtacaggagattaagaagacagaagatgcctcattgcacccgctgcttcag
gagatttacagcgacatgtactaa
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