Clupea harengus (Atlantic herring): 122132216
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Entry
122132216 CDS
T09045
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00100
Steroid biosynthesis
char01100
Metabolic pathways
Module
char_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
122132216 (lss)
Enzymes [BR:
char01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
122132216 (lss)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
122132216
NCBI-ProteinID:
XP_042562978
UniProt:
A0A8M1KKT6
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MMTEGTCLRRRGGPYKTDPATDLTRWRLSNVEGRQCWKFLEDEESAERDLSVLEAYSLGL
DTGKFIPDFPAAQSAVEAAVKGMEFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVASIP
LPDAWKKEMVRYLRSVQLPDGGWGLHIEDKATVFGTALSYTSLRILGVDPDDPDMVRARS
NLHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWMPAHPSTLWCHCRQVYL
PMSYCYAVRLSAKEDPLVLSLRQELYVQDYSTIDWPAQRSNVAACDMYTPHSTLLTMAYL
VMNVYEAHHSTFLRKKAVEELYDHIQADDRFTKCISIGPISKTINMLVRWYVEGPTSPVF
QEHVSRIADYLWIGLDGMKMQGTNGSQLWDTAFAVQAYLEAGAQDNPKCTGTLSRAHEFL
DLTQIKENPPEYEKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCPFITSTV
PKERLFEAVNVLLSMKNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVM
QALKHFQLAYPEHRVEEIRSTLEEGLEYCRRVQRPDGSWEGSWAVCFTYGVWFGLEAFAC
MGHTLQEKPARAEVLGACDFLLANQMEDGGWGEDFESCEQRRYMQSKNSQIHNTCWALLG
LMAASCPDVRAIERGIKVLVDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWTLGR
FSRLYPSSPLAGKVKL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggaaggaacgtgtctacggagacgaggaggtccctataagacagaccccgcc
acagatctcacccgttggcgactgagtaatgtagagggcaggcaatgctggaagttcctg
gaggatgaagagtccgcggagagggacctgagcgtgctggaggcgtactcactcggacta
gacacgggcaagttcatccctgacttccctgctgcccaatctgctgtggaggcagctgtg
aaaggtatggagttctacagccacctgcaggctgaggatggccattgggctggggactac
ggtggacctctcttccttctgcctggcctgctgatcacatgtcacgtggcctccatcccc
ctccccgatgcctggaagaaagagatggtgcgctacctgcgctcagtgcagcttcctgat
ggaggatggggcctacatattgaagacaaggcaactgtgtttgggacagccctaagctac
acttctctgaggattctgggggttgatcctgatgacccagatatggttcgggcaagaagc
aacctgcacagtaaaggtggtgcagtgggaatcccttcatggggtaaattctggctggcc
attttgaatgtatacagttgggaaggcatgaacactcttctgccagagatgtggctgttc
cctacatggatgccagcacacccctccaccttatggtgtcactgccgacaagtgtacctg
cccatgagttactgctacgctgtcagactttctgctaaagaggatcccttagttctcagc
ctcagacaggagctgtacgttcaggactactccaccattgactggccggcacagaggagc
aatgttgcagcctgtgacatgtacactcctcacagtaccctactcacaatggcatacttg
gtaatgaacgtgtatgaggcccaccacagcacctttctgagaaagaaggcagtggaggag
ctctacgaccacattcaggccgacgatcgcttcacaaagtgtatcagtattggccctatc
tccaaaaccatcaacatgttggtacggtggtatgtggaagggccaacctcccctgtcttc
caggagcacgtgtccaggattgcagactatctttggattggtcttgatggaatgaagatg
caggggaccaacggctctcagttgtgggacactgcctttgctgttcaagcatatctggag
gccggggcgcaggacaaccccaagtgcactggaactctcagccgtgcccatgagttcctc
gacctcactcagataaaagagaaccctcccgagtatgagaagtactaccgtcaaatgaac
aagggtggtttccccttcagcaccagagactgcggctggatagtggccgattgcactgct
gagggcctgaagtctgtgatgctgctgcaggagcagtgtcccttcatcaccagcacagtc
ccaaaggagagactctttgaggctgtcaatgtgcttctcagcatgaagaactctgatggg
gggtttgccacctatgaaaccaaacgtggagggaggttactggagctcctgaatccctct
gaggtgtttggtgacattatgattgactacacatatgttgagtgtacctcagctgtgatg
caggctctcaaacacttccagcttgcctaccccgagcacagagtagaggagatcaggtct
actctggaggaaggactggagtattgcaggagagtgcagagacctgatggatcatgggaa
gggtcctgggctgtgtgtttcacttatggcgtctggtttggcctggaggcgtttgcatgc
atgggtcataccctccaggagaagccggcgcgtgcggaggtgctgggtgcctgcgacttc
ctgctggccaatcagatggaggacgggggctggggggaggactttgagtcatgcgagcaa
cggcgctacatgcagagcaagaactcccagatccacaacacctgctgggccctgctgggc
ctgatggctgccagctgccctgatgtccgagccattgagagaggaattaaggttctcgtg
gacaagcagctgcctaatggagactggccacaggagaacatttccggggtatttaacaag
agctgtgccataagctacacgtcctacaggaacgtgttcccagtgtggaccctgggacgc
ttctcacgcctctacccctccagccccctcgctgggaaagtcaagctgtga
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