Clupea harengus (Atlantic herring): 122132389
Help
Entry
122132389 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 40-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
122132389
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122132389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
NOA36
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
122132389
NCBI-ProteinID:
XP_042563098
UniProt:
A0A8M1KL53
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MQRSKSFEHGNRKPQQNKGTMFECETCRNRYRKRENFENHKKFYCSELHGPKNKPIPVRE
PESDVFVQSVPPLMTRTVCHSGNIEQSSMIRKRRKMKSFGDDDDQSPTDKNPPCSRSFDS
CQMSSRVVSSSQFPQRAVLVNLQPANNTGPVPPIQLMARVAETPESRLSPARDNNISTST
KDRGEMQRQGSGTSVIRHTNSLSRPNSFETYESIDLSSPVDSSTKDMQGAVISSTESSAN
TALQNYHKEMSIPKVSSQEKYIADTPKEHAPAVDSESSAPTQQSRLVRQNNIQVPEILVT
EEPDREHESQVSDKVSVEKPADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGES
SFESSLSRSLSRDSSLSRCSSISASFERDEPPRADSPSRESVTKPPDVQGPPVACNTLSV
PVMMRRAASEQISCTQPSIAISCDYRSKSFDCSSLXNRSPSPLDTAMPKSAQPATTAQVP
LIERRRGPLVRQMSLKIGPESQQFVGKQHTVSLQRAPPSNIVSVPQHRPPMINRASLTQP
FVLHSGEPPPPQKNEHVVQSINLGTQTQHPQVHGLPHPWHQTSRVVAIQKVLPAAQIIPC
QTDLDSKPAETQKSLVPKYQLQYPVLKSQTYSFSGPQGTQVALPVITIRIGNEIESVSKA
AEGIQNVYVAQKNLQGTSNKASIVLPLGIQGDAPSQNQSGSAPVPQILITHEQIYPACSM
ACKTNISTMNIAAIHNKAGLDAHTEKPQVQVQPGANTQSHTSDNRNNPSLGSLHCTQKMA
SVNLCPQQEPTASSKRMLSPANSLDIAMEKHQKRAKDEHGAACQPTDGRSLSYLNSKMAE
VTRQRKLTLVRQVCTTEPVDSPIETEAPQHLEKLDPGKDFQVPDTGSATTTETTAQMQDD
KPPSPTDHPMQSPVSRTSPGVQSPVPANATLKPQDKPEELQRWSSHKSPLRPSSFQGQVK
LASSVSVVNTRDSHRLSFPSLKTATTFTWCYLIKRKPLHIPQTDQRISAYSTWPVSKNNP
NPLGLPTKIVMSLFDSKQKAKKIHYTQAITTSLKSDILTYSSKLKDVMPKVMLAQKSLST
EGKSKARPESRPPNEADRESLAKAEPRRIKIFDGGYKSNEEYVYVRGRGRGKYICEECGI
RCKKPSMLRKHIRTHSDVRPYHCAHCNFSFKTKGNLTKHMKSKAHSKKCLEMGVSVGLIE
DQDAEDSGDRGRGSSADRPDSDGDDSDGPEDEDNDGEEEDEEDSQAESGLSATPSVSASP
QHFSTDVAPSSLLAQMSISSCQPPPTPSLRPNTCPPSVPQQADVHLHADPLLEPHLSPPP
FARYPLAIASAIATTCVTYSSSSSDPHGSDSESVHMMSPVSPCRQMSIDYPDFDVPPSPP
APGKGSKLGQDASARPPPLPSSESGVPVDRGTQTSSFAHHGSLHYPSPGPLSLLGEPLAH
THLFSHLPLHSQQPSRSPYSMVPVGGIQLVPAGLAAYSTFVPIQAGPVQLTIPALSVIHR
NTSPLPALLGCDPGSGTATSPARPGSSPTAQHPLVVQESVGNMLPCFPLSQMAGIRTLGG
PRTTLQQVGLEALGVMGLANSGLAPTQLLQQQNLALNASLGVQVLAASPAVQSSQVPQAH
IPGLQILNIALPALIPSLSPLSTLSPLPSAPDRPWHLEASAGLGLGPSRSPSVCAIADST
PPVLTLSASPPVAVSTAPMAPVVVATHAPKGASPCRPSLGSRCAGGGGGAQSACTSERKG
RSPTNQTLSSPDSFDGASQIAPAATTTTGGSSEARPPHKHTSPRPPALADDCSEASSDDE
DRLVIAT
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggagcaagtcctttgagcacggaaacaggaagcctcaacagaacaaagggaca
atgttcgagtgtgaaacttgccgtaaccggtacaggaaaagggagaactttgagaatcac
aagaagttttactgctccgagttgcacggtccaaaaaacaagcccattcctgtcagagag
ccagagtcggatgtgtttgtgcagagtgttccgcccctgatgacaagaacagtctgtcac
tcagggaatattgagcaatcgtcaatgatcagaaaacggagaaaaatgaaaagttttggg
gatgacgacgatcagtctccaactgacaaaaatccaccttgttctagaagtttcgattcc
tgtcagatgtcctctagagtagtaagtagtagtcagtttccccagagagccgtgctcgtc
aacctgcaacctgccaacaacacagggccggttcctccaattcaactcatggcaagagtg
gcagagacaccagagtccaggctgtctccagcaagagacaacaatattagcacctccacc
aaagacagaggtgagatgcagcgacaaggcagtggcacatctgtcatacggcacaccaac
tctctgagcaggccaaattcatttgaaacatacgagagtatcgatctgtcctctccggtt
gattcttcgacaaaggacatgcaaggggcagtcatctcaagcactgaatcctcggctaac
actgcattgcagaattaccacaaagaaatgtcgatacccaaggtttcgagtcaagaaaaa
tatatcgctgacacccctaaggaacatgcaccagcggtagacagtgagagttctgcccca
actcaacagtcaaggctggtccgtcaaaacaacatccaagttcctgaaattttggtcacg
gaggaaccagatcgggaacatgagagtcaggtatcagacaaggtatcggtggagaaacct
gcagacacttttaactggcctcagcggagcgagagtctgtccaagttgccgacggagaag
ttgccgcccaagaagaaaaggatccggctggctcagatggagcactcttcgggtgaatcc
agcttcgagtcctcgctctccagaagccttagcagagacagcagtctctcgcgatgttcg
agcatctcggcctcgtttgaaagggacgagccacccagagctgatagtccttccagggaa
agtgtcaccaaacctccagacgttcaaggaccacctgtagcgtgcaacacactcagcgtc
ccagtcatgatgagacgagctgcctcggaacagataagctgcacccaaccgtccattgcg
atttcctgtgactaccgcagcaagtcctttgactgcagcagtctcnccaaccggtccccc
tctcccttggacaccgctatgcccaagagtgcccagcctgcaacaactgcacaggtaccc
cttattgaaagaagaagaggacctcttgttcgtcaaatgtccctgaaaattggaccagag
agtcagcaatttgttggaaagcagcatactgtttctcttcagagggctcctccttcaaat
atcgtttctgttcctcaacacaggcctccaatgatcaacagggccagtttaactcagcct
tttgttttacattctggagaaccacctccgccacagaagaacgaacacgtggtccaaagc
attaacttgggcactcaaactcagcatccacaagttcatggacttccccatccatggcat
caaacctcaagagttgttgcaatccaaaaggtgctacctgcagcccaaatcattccctgt
caaacagatttggacagcaagcctgcagaaacacagaagagtcttgtccccaagtatcag
cttcagtatccggttttgaaaagtcaaacatactctttctctggtccacagggaacgcag
gtggccttgcctgtaataacgatacggatcggcaacgagattgaaagtgtttccaaggca
gctgagggaatacagaatgtatacgttgcacagaagaatcttcagggaacgagcaataag
gcatccattgttttacctcttggcatccaaggagacgcaccttcacagaaccaatcagga
tcagcgccagtgccacagatcctgataactcacgagcagatttaccctgcttgcagtatg
gcttgcaaaaccaacatctccaccatgaatattgctgccattcacaataaagcgggacta
gatgctcacaccgagaaaccgcaagttcaagtacagccaggggcaaacacacagagccat
accagcgataatcgtaacaacccatctctcggctctttgcactgtacccagaagatggcg
tccgttaacctctgcccgcaacaggagcccactgcctccagcaagcgcatgctttcccct
gccaacagcctggacattgccatggagaaacaccagaaacgggcaaaagacgagcatgga
gcagcgtgccagccgaccgatggcaggtccctcagttatctcaattccaagatggcggag
gtgactcgccaacggaagctaacgctcgtcagacaggtctgcaccactgaacctgtagac
agtcccattgaaactgaagccccgcaacacttggagaagctggaccctggcaaagacttc
caggtgcctgataccggcagcgcaacaacaactgagacgactgcgcagatgcaggacgac
aagccgccatctccaacagaccatccgatgcagagccctgttagtcgcacctccccaggg
gtccagagtccagtccctgccaacgctaccctgaagccacaggacaagccggaagagctg
cagcgctggtcttcacacaagtcccccctgaggccttcctctttccaaggacaggtgaaa
ctggcctcgtccgtgtctgtcgtcaacacccgggacagtcaccgcctgtctttccccagt
ctgaaaacggccacgacgttcacctggtgctacctcatcaagaggaagccactgcatatt
cctcagacagaccaaaggatctctgcatactcgacctggccagtcagcaagaacaacccc
aacccgctgggcctacccaccaaaatagtcatgtctctattcgattcaaagcagaaggct
aagaaaatacactacacccaagcgataaccacaagtttgaagtctgacatattgacatac
tccagcaagctgaaggacgttatgcccaaggtcatgctcgcacagaagtccctctccacg
gagggcaagagtaaagcacgacccgaatctcgaccccccaacgaggctgacagggagtcc
ctagctaaagcagagcccagacggatcaaaatatttgatggagggtacaaatccaatgag
gagtatgtgtatgtgcgcggccggggccgtgggaagtacatctgtgaagagtgtgggatt
cgctgcaagaagccaagcatgcttcgcaaacacatccgcacccactcagacgtccgccct
taccactgcgcccactgcaacttctctttcaagactaaaggcaatctgacgaaacacatg
aagtctaaagcccacagtaagaagtgcttggagatgggagtatccgtgggtttgatcgaa
gaccaggatgcggaggattcaggagaccgaggaagaggaagcagtgccgaccgtcccgac
tctgacggtgacgactcggatggtccggaagacgaggacaacgacggcgaggaggaggac
gaggaggacagccaggcggagtcgggtctctccgccacgccctccgtctccgccagcccc
cagcacttcagcactgacgtggcgcccagctcgctcctggcacagatgtccatcagctcg
tgccaaccgccgcccacgccctccctccgacccaacacctgcccaccctctgtcccccag
caagcagatgtccatctccacgctgatcccctgctcgagccccacctcagtccccccccc
ttcgcccgataccccctcgccatcgcctctgccatcgccaccacctgcgtcacctactcc
tcctcctcctccgacccccacggctccgacagcgagtccgttcacatgatgagccccgtg
tcaccctgcagacagatgtccatcgactaccccgactttgatgtgccccctagtcccccg
gctccaggcaagggctccaagctcggccaggatgccagtgcccgtcctccccccctgccc
tcgagcgagtccggagtacctgtggatcgcggaacccagacttcctccttcgcccaccac
ggctcccttcactacccctcgccgggtcccctgtccctcctgggggagcccctggcgcac
acccacctcttcagccatctgcccctgcactcccagcagccctcgcgctccccttacagc
atggtgcccgtaggcggcatccagctggtgcccgcaggcctggcagcctactccaccttt
gtgcccatccaggccggcccagtccagctcaccatcccggccttgagcgtcatccaccgc
aacaccagcccgctccctgcgctgctggggtgcgatccaggctcgggcactgccaccagc
ccggcgcggcccggcagttcccccaccgcccagcacccactggtggtccaggagagtgtg
ggcaacatgctgccatgcttcccgctgagccagatggcaggcattaggaccctggggggg
cctcggaccacactgcagcaggtcgggctggaggccctcggcgtgatgggcctggccaac
tcgggcctcgcgccgacccaattgctccagcagcagaacctggcgctcaacgcctccctg
ggcgtgcaggtcctggccgccagccccgcggtgcagtccagccaggtgccccaggctcac
atcccgggcctccagatcctcaacatcgccctgccagcactcataccctccctcagcccc
ctgtccaccctcagccccctcccgtctgcccctgacaggccttggcacctggaggcgtcg
gcagggctgggtctgggtccgtcccggagtccgtctgtttgcgccattgctgactccacg
ccgccggtcctgactctatcggccagtcctccagtggcggtgtccacagccccgatggcg
cccgttgtcgtagcgacccacgccccaaaaggcgcctcgccctgcaggcctagcctgggg
tcgaggtgcgcggggggtggcggcggcgcccagtctgcctgcacctccgagaggaagggc
aggtctccaaccaaccagaccctctcctcccctgactcttttgatggtgcctcgcaaata
gccccagctgccaccaccaccacagggggcagtagtgaggctcggcctcctcacaagcac
actagtcccaggccaccagccctggccgatgactgcagcgaagcctccagtgatgacgag
gaccgactagtcatcgccacctga
DBGET
integrated database retrieval system
