Clupea harengus (Atlantic herring): 122132928
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Entry
122132928 CDS
T09045
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122132928
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122132928
04261 Adrenergic signaling in cardiomyocytes
122132928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
122132928
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122132928
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VWA
dCache_1
VWA_3
VWA_2
VGCC_alpha2
dCache_2
CobT_C
Caps_syn_GfcC_C
VWA_CoxE
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
122132928
NCBI-ProteinID:
XP_042563828
UniProt:
A0A8M1KN68
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Position
5:27506978..27533620
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AA seq
812 aa
AA seq
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MYSMLSASFVHDSFIIVLQCLKKADNTTAPLPPPLSQRIVEAAEEAHHEHEENPDLQYDY
FNAVLINEVDELGNSLDMGGEFLLEPNDHFNNLAVNLSLSVVQVPTNMYNKDPAIVNGVY
WSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGVKWYPDEHRVIAFDCRNRKWYIQA
ATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQEIRFVEPCLNG
TLVQADRANKHHFREHLDKLFAKGIGLLGNALTEAFTILNEFNQTGRGSLCSQAIMLVTD
GATQMYDEVFEKFNWPDRKVRIFTYLIGRESAFADNMKWMACANKGYFSQISTLADVQEN
VMRYLHVMSRPKVIDHEHNTVWTEAYVDNALTQAHKLKDSRGLSPITTVAMPVFSTKNET
RNQGILLGVAGTDIPLQELMKAVPKHKLGIHGYAFAVTNNGYILIHPDLRPLYQEGQKRR
KPHYSSVDLSEVEWEDTHDVLRNAMVNRKTGTFSMEVMKTVDKGKRVLKMHNDYYYTDIK
GTPFSVGVALSRGHGKYFFKGNVSIDAGLRDLDQQDVALADEWTYCNTDEHHEHRYLTQI
QAIKLYLTGRKPHLKCDRELIQQVLFDAVVTAPMEAYWTGLALNKSENSDKGVEIAFLGT
RTGLSRTNLFVNPEQLTNQDILTAEDTEGVFNADHFPLWYKRAAEQVPGTFIYSIPFSSV
MENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLDFFQRKFWTASRQACNCNLFLSPTKPN
LSNIYTTYSHITYSCYNCIQTELLALSVLNFY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgatgctatctgcaagctttgtacatgactcgtttataattgtccttcagtgt
ctcaaaaaagctgataacactacagcacccttaccccctcccctctcacagcgcatcgtt
gaagcagccgaagaagcacatcatgaacatgaggagaatccagacctacagtatgactac
ttcaacgccgtgctcatcaacgaggtggacgagctggggaacagtttggacatgggcggg
gagttcctcctggagcccaacgaccacttcaacaacctggccgtcaacctcagcctcagc
gtggtgcaagtgcccacaaacatgtacaacaaagatccagctattgtgaatggtgtgtac
tggtccgaagctctgaataaagtgtttgtggacaattttgaaagagacccctcacttata
tggcagtactttggaagcgccaagggtttcttcagacaataccctggtgttaaatggtac
ccagatgaacaccgtgtcattgcatttgactgcaggaacaggaaatggtatatccaggcg
gctacttctccaaaggacgtggtgatcctggtggacgtgagcggcagcatgaaggggctg
aggctgaccatcgcccgccagaccgtctcctccatcctggacacgctgggggacgacgac
ttcttcaacatcatcgcctataatcaggagattcgcttcgtggagccatgcctgaatgga
accttggtccaggctgacagggccaataagcaccatttcagagagcatctggacaagctt
tttgccaaaggaattggtcttctaggtaatgcactgactgaggccttcaccatactgaat
gagttcaaccagacggggcgggggagcttatgcagccaggccatcatgctcgtgactgat
ggagccacacagatgtatgatgaagtctttgagaagttcaactggcccgataggaaggta
cgcatcttcacttacttgattggacgtgagtcggcttttgcagataacatgaaatggatg
gcctgcgctaacaaagggtacttcagccaaatctccacattggccgatgtgcaggagaat
gtgatgcggtacttgcatgtgatgagtcgacctaaagtcatcgaccacgagcataacact
gtctggaccgaggcctatgtggacaacgcacttacacaagcacacaagctcaaggatagc
agagggctcagtcccataaccactgtggccatgcctgtgttcagcaccaagaatgagacg
agaaaccaaggcattcttctgggtgtggcagggactgatatccctcttcaagagcttatg
aaagctgtaccaaaacataaacttggtatccatggatatgcctttgccgtcaccaataat
ggatacattctcatccacccagacctgaggcctttgtaccaggagggccagaagaggagg
aagccccattacagcagtgttgacctatcggaggtggagtgggaggacacacatgatgtt
ttgcgtaatgccatggtgaacagaaagaccggaacattctctatggaagtgatgaagact
gttgataaagggaaacgtgtcctgaaaatgcacaacgactattattacacagacatcaaa
gggaccccattcagtgtaggggtggccctctccagaggtcacggtaaatacttcttcaaa
ggaaatgtttccatagacgcaggcctccgtgacctcgaccaacaagacgtggccctggca
gatgagtggacctactgcaatacagatgagcaccatgaacatcgctacctgacgcagatc
caggccattaaactctacctgactggacgcaagccccacctcaagtgtgacagggagctg
atccagcaggtgttgtttgacgcggtggtgactgctcccatggaggcctattggacgggc
ctggctctgaataagtctgaaaattctgataaaggtgtggagattgcattcctgggcaca
cgcactggcctctccagaaccaacctgtttgtgaacccagaacagctgaccaatcaagac
atcctgacagccgaggacacggagggcgtgtttaacgcagaccacttccccctgtggtac
aagagggcggcggagcaggtgcctggaaccttcatctactccatccccttcagctcagtc
atggaaaataaaagtgttgttctggcaagcaccgctatccaactgctggatgaccgaaag
tcaccaatagtagccgctgtagggatacagatgaagctggatttctttcagagaaagttc
tggacagccagtcgacaggcatgtaactgcaacctttttctgtctccaaccaaacccaat
ttaagcaatatatacacaacatatagtcatatcacctatagctgttataactgtatccaa
actgaacttttggctttaagtgtgcttaatttttactga
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