Clupea harengus (Atlantic herring): 122133118
Help
Entry
122133118 CDS
T09045
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122133118 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122133118 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
122133118 (sptbn4a)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122133118 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
122133118 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Xre_MbcA_ParS_C
Mur_ligase_M
Motif
Other DBs
NCBI-GeneID:
122133118
NCBI-ProteinID:
XP_042564536
UniProt:
A0A8M1KKF6
LinkDB
All DBs
Position
8:28301521..28350640
Genome browser
AA seq
1412 aa
AA seq
DB search
MLMARDGARDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGKELIQEQPELQSVVQQK
LEEMRECWGHLESTTKAKARQLFETQNHRTPGTNPSAKALPDLDQQLSLLQEQPPTVGSA
SPSATAASLATMPTLLQPRPTFSQQLQRIQSMESQLIRGVGMTHLGGSVADVADVGAAEP
QAGLLRGVEGEERPTETRICRLIEPLKERRRILLASKEMHQVSQDLEDEIVWIQENLPLA
SSKEYGTNLQSVQQLMKTNEMLQMELQSRRERLEEVLDRAGAVAALRTPETDLVREGAEH
ARQLWEVLMVEAERRTVMLDAVFHAQQYYTQATKAESWLSGQKLQVINEERGTDEPSTLR
LLKEQLALEQIVENYAETVSFLSQQCRRMLELGHPDSEQITKQQSHIDRLYVSLKDLVEQ
RKTKLEQQYWLYQLKREVEGLEKWIADREAVASSTEMGQDLEHVTALQDKFTEFNAETRA
AGQRQMESVNKMVNEMIDCGHADAATIAEWKDGLNESWADLQELMETRTQMLAASHQLHK
FFTDCQEVLVQVEGKMRQLPEVRSCQVSTANPGTLKRLLHSFEHALQLLVTQVRQLQENA
AQLRAIYAGEKADAILAREQEVMQAWRELLVSCEGSRVQVTTVTDKVQFFALVRELSMWT
DGIMGQIGPSPDSARDVSGVETMMSQHQNLKAKMEAKSEIFSQCVEMGKMLLAARNPASE
EVKEKLDHVMAKQKDLNERWDHHWEKLQHTQQRLQDAQRILAEKAWLTSKEPMISPASPR
DMLGGAGGAGGADEVEQLIRRHEAFRKAAATWKEHFSSLRQVEKQKLKEEKSRQSVSSSL
LNRQMFPLSCLVGSSSSSSSSSTPFRQSLQDQLDIKSGPDIPQLAAHSLAQRLGASVGPY
SPVMNGSSYHSLNPQAGGAMMDNPGYHVLAQQAAQLGVDSYQGLNQQGMMGVDSYQGLNQ
QGMMGVDSYQGLNQQGMMGVDSSSSYLSNPGMGGGAGAGMMPDPKMAYAWQHLKTDCMQP
KLNHIHKAVPALLEAHHAQQQQQQQGEIHPGIGIEHGLELLHGRLQRDPRGSRSDPQMDH
LRREREYRLGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEQASGKPSDQESG
KEPTDKRPGDKRATMAEIVEQIQEKEAAEARGEVYRAASVLSAPCGRYDRPRARDRPKPR
RRPRPKEPEETTRRSRSAPAHAVPVIPSHTVQVEGFLYRKHEPDGKEKSPNSKSWVNLYC
ILANGEIAFYKDARHITTPYNDEPLLNLHTCTCDSTNGYKKKKNAFILKVPNSDDYIFLA
KDEDEFKKWVFSINTSLQEHEDIVKWEKPTTSSTDPDKSEQRERSEGAEPFEAADRSERG
DGSEKADGSEKVDTSERAEGRERGSSTSGRSK
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggcgcgggacggagcgagagacgaggcccagaagctgcaccgcaaatggatg
aagcaccaggccttcatggccgagctggcgcgcaacaaagagtggctggccaagatcgag
caggagggcaaggagctgatccaggagcagccggagctgcagtcggtggtgcagcagaag
ctggaggagatgcgtgagtgctggggtcacctggagagcaccaccaaggccaaggcccga
cagctcttcgagacacagaaccaccggacccccgggaccaacccgtcggccaaggccctc
ccagacttggaccagcagctgtccctgctgcaggagcagcccccgacggtgggctcagcc
tccccctcggccaccgccgcctccttggccaccatgcccaccctgctgcagcccaggccc
accttcagccagcagctccagaggatccagtccatggagtctcagctcatccgcggggtg
ggcatgactcacctggggggcagcgtggcggacgtggcggacgtgggcgcggctgagccg
caggcgggcctgctgaggggggtggagggggaggagcggcccaccgagacgcgcatctgc
cgcctcatcgagccgctcaaggagaggcgacgcatcctgctggcctccaaggagatgcac
caagtcagccaagacctggaggacgagattgtgtggattcaggagaacctccctctggca
tcctccaaggaatacggaaccaacctgcagagtgtgcaacagctgatgaagacaaacgag
atgctgcagatggagctgcagagccggagagagcgattggaggaggtgttggacagggcg
ggagcagtggcggcgctgcgcacgccggagacggacctggtgcgagaaggggcggagcac
gcgcggcagctgtgggaggtgcttatggtggaggcggagcgtcgcaccgtcatgctggac
gccgtgttccacgcccagcagtactacacgcaggcgaccaaggccgagtcctggctcagt
ggacagaagctgcaggtcatcaacgaggagagaggaacggatgagcccagcaccctgcgg
ctcctgaaggagcagctcgctctggagcagatagtggagaactacgccgagacggtcagc
ttcctgtcccagcagtgccgcaggatgctggagctcggacacccagacagcgagcagatc
accaagcagcagtcccacatagaccgcctgtacgtgtcgctgaaggacctggtggagcag
cgcaagaccaagctggagcagcagtactggctgtaccagctcaagcgtgaggtggagggc
ctggagaagtggattgccgatcgggaggccgtggccagctccacagagatgggacaggac
ctggagcatgtcacggctctgcaagacaagttcacggagttcaatgcggagacgcgcgcg
gccggccagaggcagatggagtctgtcaacaagatggtgaacgagatgatcgactgcggc
cacgcggacgccgccaccatcgccgagtggaaggacggcctgaacgagtcgtgggccgac
ctgcaggagctgatggagacgcggacgcagatgctggccgcctcccaccagctgcacaag
ttcttcaccgactgccaggaggtgttggttcaggtcgaggggaagatgcgtcagctccct
gaagtgcgctcgtgtcaggtgagcacagccaaccccggcacgctgaagaggctgctgcac
tccttcgagcacgcgctccagctgctcgtcactcaggtgcggcagctacaggagaacgct
gcccagttgagggccatctatgctggggaaaaagcagatgccattctggcccgtgagcag
gaagtgatgcaagcctggagggagctgctggtgtcctgcgagggcagccgtgtgcaggtc
accacggtaacagacaaggtgcagttcttcgctctggtgcgagagctgagcatgtggaca
gatggcattatgggccagataggaccatctccggacagtgccagggacgtgtccggtgtg
gagaccatgatgtcccagcatcagaatctgaaggctaagatggaggccaagagtgaaatc
ttctctcagtgtgtggagatgggcaagatgctcctggcagcccgcaaccctgcctctgaa
gaggtgaaggagaagctggaccatgtgatggccaagcagaaggacctgaatgagcgctgg
gaccaccactgggagaaactgcagcacacgcaacagaggctccaggacgcccagaggatt
ctagctgagaaggcgtggctaacctccaaagagccaatgatcagccccgccagcccacgt
gacatgttgggcggggccggaggggcgggcggagccgatgaggtagagcagctgattcgt
cgacacgaggcgttccggaaggccgcggccacatggaaggaacacttcagctccttacgc
caggtggagaagcagaagctgaaggaggagaagagcaggcagtctgtttcttcgtcgctg
ctcaacaggcagatgtttcctctctcctgcctggtcgggagctcgtcctcctcttcatcc
tcctccacacccttcagacagagtcttcaggaccagctcgacatcaagtctggcccagac
atcccccagctggctgcccactcgctggcccagaggctgggggcctccgtgggcccctac
agccccgtcatgaacggctcgtcctaccacagcctcaacccacaggcagggggcgctatg
atggacaatccgggctaccacgtgctggcccaacaggctgcacagctcggggtggacagc
taccaggggttgaaccaacagggtatgatgggggtggacagctaccaggggttgaaccaa
cagggtatgatgggggtggacagctaccaggggttaaaccaacagggtatgatgggggtg
gacagcagctcgagctacctgagcaatcctggcatgggggggggtgccggcgctggcatg
atgcccgaccccaagatggcgtacgcgtggcagcacctgaagactgactgcatgcagccc
aagctgaaccacatccacaaggccgtgcccgctctcctggaagcccaccacgcccagcag
cagcagcagcagcagggggagatccacccgggcattggcatcgaacacggcctggagctg
ctacacggcaggctccagagggacccccgcggcagccgctccgacccccagatggaccac
ctacggagggagcgcgagtacaggctgggccggcagacctccagtgagcaggagatccag
gcgcgcctcaacgagctgcccatgatcgtgaggcaggagcgctatcgcaggcggctcgag
aggcagtcgtccagcgagcaggagcaggccagcggcaagcccagcgatcaggagtccggc
aaagagcccacggacaagagacccggggataaacgcgccacaatggctgagatcgtcgag
cagattcaagaaaaagaggcagcagaggctcgaggggaggtttaccgggccgccagtgtt
ctctcggcgccctgtggccgctacgaccgcccgcgagcgagggaccggcccaaacctcgg
aggaggccgaggcccaaagaaccggaagagacgacccggcgatctcgctcggcgcccgcc
catgccgtgcccgtcatccccagccacaccgtccaggtggagggcttcctctaccgcaag
cacgagcctgatggcaaggagaagagtcccaacagcaagtcctgggtgaacctctactgt
atccttgccaacggagagattgctttctacaaggacgcgcgacacatcaccacgccatac
aacgacgagccgctactcaacctgcacacctgcacctgtgacagcaccaacggatacaag
aagaagaaaaacgccttcatccttaaagtcccaaattcagatgactatattttcctggct
aaggatgaggatgagttcaagaagtgggtgttcagcatcaacacctccctgcaggagcac
gaggacatcgtcaagtgggagaagcccaccacctcctccacagacccagacaagtcggag
cagagggagcgttccgagggagccgaaccctttgaggcggccgaccgctcggagagaggc
gacggctcggaaaaggccgacggctcggaaaaagtcgacacgtcggagcgggcggagggc
cgggagcggggttcgagtacttctggcaggagcaaatga
DBGET
integrated database retrieval system
