Clupea harengus (Atlantic herring): 122133302
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Entry
122133302 CDS
T09045
Symbol
ube3d
Name
(RefSeq) E3 ubiquitin-protein ligase E3D
KO
K20803
ubiquitin-protein ligase E3 D [EC:
2.3.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122133302 (ube3d)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122133302 (ube3d)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
HECT type E3
122133302 (ube3d)
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Gene cluster
GFIT
Motif
Pfam:
HECT_2
POU2AF2
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
122133302
NCBI-ProteinID:
XP_042565148
UniProt:
A0A8M1KRV4
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Position
11:complement(19641969..19659469)
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AA seq
385 aa
AA seq
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MEETGKQQHEIFLELRQRLESGLLILRKDVAHSPTEVKVFGSDSSLLIQTSRGLWRAELP
PRVSVVPGSCQPTPTGDAGEGLHFRLRLRVDQQTESRGSVIERIQVQQSYGFCCQACGSR
ILEQRVFQRVLPLPGGNWNTLVGEWCCHPDPFANRKLLPRTEDCLTGDTYFLLARDNSCN
QTLTVEPNPTSARSAANHSQDSEKPRHVHRTTVKEVSCKNCSSMLGEALTGDALKFYITE
VMEIESEDCETKRAGNRLEFVEKTLSARHKNIFVSGFLNTDTLVGLVSRESGNRQRHTHL
FLVTVAVPTSINHARSQCSQSPLPPLQFHIHQDIVSAWERDISVHNLTLPHTTCQEVLQL
LSASTSCLPPSLRCMNSYQVAFMRR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaactgggaagcaacagcacgagatatttcttgaattgagacagcgtttggaa
agcggcctcttgattttaaggaaggatgtcgctcacagccccaccgaggtgaaggtcttc
ggcagcgactcctccctcctcatccagacctcccgtggactgtggcgtgccgaactgcca
ccacgggtcagcgtggtgccgggctcctgccagcccacccccacgggcgatgcaggagag
ggactccacttcagactgcgcctgagagtcgaccagcaaacagagtcgcgggggagtgtt
attgaacggatacaggtccagcagagttatggcttttgttgtcaggcctgcgggagtcgc
atcctggagcagagggtgttccagcgggttcttcctctccccggcgggaactggaacacg
ttggtgggtgagtggtgctgccacccggatccctttgccaacaggaagctcctcccgcga
acggaggactgcttaacaggggacacctacttcctgttggcgagggacaacagctgcaac
cagacgctcacagttgagcccaaccccacctctgcccgctcagctgccaatcacagccag
gactctgaaaagcccaggcatgtccaccgtaccactgtaaaagaggtttcctgtaaaaac
tgctcctccatgctcggagaggccctcacaggagatgcgttgaaattctacataacggag
gtcatggagattgaaagtgaagactgtgaaacaaaaagggcagggaatagattagagttt
gtggagaagactctgtccgccaggcacaagaacatctttgtctctggctttttgaacact
gacaccctggttggcctcgtttcccgagaatccggtaaccggcaacggcacactcatctc
ttcctggtgacagtcgctgtcccgacgagcatcaatcacgctcgcagtcagtgcagtcaa
agtcctctacctcccctgcagttccacatccaccaggacattgtaagtgcctgggagagg
gatatcagtgttcataacctgaccctccctcacaccacctgccaggaagtgcttcagcta
ctgagcgcatccacttcctgtctgcctccatcgctgcgctgcatgaactcctaccaggtg
gcctttatgagacgataa
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