Clupea harengus (Atlantic herring): 122133383
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Entry
122133383 CDS
T09045
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor-like
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04080
Neuroactive ligand-receptor interaction
char04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122133383
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122133383
04081 Hormone signaling
122133383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
char04030
]
122133383
G protein-coupled receptors [BR:
char04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
122133383
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GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
122133383
NCBI-ProteinID:
XP_042565433
UniProt:
A0A8M1KSM9
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Position
13:27405705..27424302
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AA seq
685 aa
AA seq
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MWIFHLLPVLYVWLKCESVFASPFTCPQICVCSINSIRCNNKTEHGATLTQKKACINLNL
QFISLKDIGSRSFDGLRDVKRIRITHSVTLESIQPKAFNNLHNLSEILIQNTRSLVHIGR
RAFNHLPNLQYLCISNTGITVFPDLTALSSLNPSFVLDIFDNLLLTSIPANAFLGMATST
MNLYNNGFKEIQSHAFNGTVIDKLILKNNKNLRVIHREAFTGAVGPTLLDVSSTGLDTLP
PRGLESVGVLMAQAAFALKRLPNFNSLRSLWSASLTYPSHCCALHSWNAHSCRALEPPVI
SDMTFEEETFGSVDSLYPELDLFRRKTALTCNPEADAFNPCEDLAGFGFLRVAIWFINIL
AIVGNLTVLLVFFTSGTKLTVPRFLMCHLAFADLCIGVYLLMIAAVDLRTRGHYSQHAIE
WQTGTGCSVAGFLAVFGGELSVYTLCTITLERWHTINHALHLERRMGLSHAAAIMAAGWL
LCLGVALLPLVGVSSYSKVSMCLTMDIETALAQAFIILLLLFNVGAFLAVCVCYARIYVA
VHNPEFPGRSADTKIAKRMAVLIFTDFLCMAPISFFAISAAFKVPLITVTNSKILLVLFY
PINSCANPFLYAICTKAFRKDACKLLSSMGCCEIKASLYRMKTYCSGSMAKSHSDGGAKR
LRGGQDPSSFQHQKQLKSEAKGKDG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttcatctgctccccgtgttgtatgtttggctaaagtgtgagagtgtgttt
gcctcgcctttcacgtgtccgcaaatttgcgtgtgctccatcaacagcatcagatgcaat
aacaagacagagcatggcgccactttgactcaaaaaaaagcttgcattaacctcaacctt
caattcatatctctgaaggacattggcagccgtagcttcgatgggctgcgtgacgtgaag
agaatacggatcacacacagtgtcacgctggaaagcatacaacccaaagcattcaacaat
ctccataacctctcagagatcctcatccagaacacaaggagcctggtgcacatcggccga
cgcgcgttcaaccacctcccaaacctacagtacctatgcatctcaaacactgggattacg
gtgttccctgatttgaccgcactgtcttcccttaatcccagttttgtcttggatatcttc
gataacctcctcctgacttcaataccagcaaatgcttttctgggaatggccactagtacc
atgaatctctacaacaatggtttcaaagaaatacaaagccatgccttcaatgggacagtg
atagataaactgatcttgaagaacaacaaaaacctgcgtgtgattcaccgagaagccttc
accggagccgtaggccccactctactggacgtgtcctcgaccgggctggacaccctaccg
ccccgtggcctggagtcggttggggtactgatggcccaggcagcgtttgccctgaagaga
cttccgaacttcaacagcctgcgaagcctctggtccgccagtctgacctaccctagccac
tgctgcgctctgcacagctggaatgctcacagctgcagagcgttggagcctcccgtcatc
agtgatatgacatttgaggaggagacttttggcagtgtggattcactgtatccagagcta
gacctcttcaggagaaaaacagccctgacgtgcaacccagaggccgacgctttcaacccc
tgcgaggacctggcaggcttcggcttcctgcgcgtggccatctggttcatcaacatcctg
gccatcgtcggcaacctgactgttttgctggtcttcttcacgagcggcaccaagctgacg
gtcccacgcttcctgatgtgccacctggccttcgccgacctctgcatcggcgtctacctg
ctgatgatcgcggccgtggacctgcggacgcgtggccactacagccagcacgccatcgag
tggcagaccggcacgggctgcagtgtggccggcttcctggccgtgtttggcggggagctg
tcggtgtacacgctctgcaccatcaccctggagcgctggcacaccatcaaccacgccctg
cacttggagcgccgcatgggcctgtcccacgccgccgccatcatggccgccggctggctc
ctgtgcctgggcgtggcgctgctgcccctggtgggcgtgagcagctacagcaaggtgagc
atgtgcctgaccatggacatcgagacggccctggctcaggccttcatcatcctgctgctc
ctcttcaacgtgggggccttcctggcggtgtgcgtgtgctacgcgcgcatctacgtcgcc
gtgcacaaccccgagttcccgggccgcagcgccgacaccaagatcgccaagcgcatggcc
gtgctgatcttcaccgacttcctctgcatggcgcccatctccttcttcgccatctccgcc
gccttcaaggtgcccctcatcaccgtcaccaactccaagatcctgctggtgctcttctac
cccatcaactcctgcgccaaccctttcctgtacgccatctgcaccaaggccttccggaag
gacgcctgcaagcttctgagctccatgggctgctgcgagatcaaggccagtctctaccgc
atgaagacctactgctcggggagcatggccaaaagccactccgacgggggggccaagcgc
ctgcgaggggggcaggacccgtcatccttccagcatcagaagcagctcaaatcagaggcc
aagggcaaagatggatga
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