Clupea harengus (Atlantic herring): 122133568
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Entry
122133568 CDS
T09045
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
122133568
Pattern recognition receptors [BR:
char04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122133568
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_5
LRR_EndoS
LRR_Zer-1
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
122133568
NCBI-ProteinID:
XP_042565956
UniProt:
A0A8M1KPH1
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Position
16:complement(13582313..13584781)
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AA seq
551 aa
AA seq
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MTGLRTLYVRAHLFAIKSELFSGLVNVEELHLRGCQIQTIKDFAFTNLSQLRHMDLTWNK
ISAITTNTFFGLQNLESLIIENNPLRHFEASSFAHFPSLRVLHLEDLRFSNSEHSGMQVL
NLSLIFGGFPHQLSDLTITSAVRPMTLVVADDSAPEVGLSLSLSGQNIVLWGCEKRFLKS
VTKLQVTAEFFLCAPDNTVAISHFTSVVNLFFSQWYTSTIQDLSGLSRLVHLKRLELTYI
DFYNQPGFNVMFNGLTQLESLSLYNCLVNSFDRVISVDMKSLKYLYLHISSETTVYKQFF
EPLNSLRSVVLFEPRLLCNCENSWFISWAKQESQVGVFPLSKQHRTLQCLNGNRLQDLDR
YGLAHCRPEEGFELFISTTGLLVIFIVAVLVYRLHSNTRGHYRYDVFVSHSGENESWVVE
RLLPSLEQRGPPFMHLCLSRKEFQLGKDIVENITDSLYRSCRTLCLVSRHYLQSNRCSLE
MRLGTYRLQVEHRDVLILVFLEKIPSNLLSAHHRLARLVKTRTYIDWPQDPAQQEAFWDI
LWSKLVTEKVL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgactgggctgcgtactctatatgttagagcacatttgtttgctataaaatctgaatta
ttttcaggtcttgtaaatgttgaagaattacacctcagagggtgccagattcaaaccatc
aaagactttgcttttacaaacctaagccagttgaggcacatggatcttacatggaataag
atttctgcaataacaacaaacaccttttttggacttcagaacctggagagcttgataatt
gaaaataatccactgaggcactttgaagcatcttccttcgcccatttcccctcgctcagg
gttctccatcttgaagatctgaggttttccaactctgagcactctggcatgcaggtcctc
aacctgagtctcatctttgggggcttccctcaccagctgtctgacctcaccatcacgtct
gctgtgcgccccatgactctggtagtcgctgatgacagcgccccagaggtgggcctgagt
ctctcactctcaggccagaatattgttttatggggttgtgagaaacgttttctaaagtca
gttaccaaactccaagttacagctgagttcttcctttgtgcgcctgacaatactgttgct
atcagtcacttcacgtctgtggtcaatttgttttttagccagtggtatactagcacaatt
caagatctttctggcttgagcagacttgtgcatttaaaaagactggaactcacatatatt
gatttctacaatcaacctggtttcaatgtcatgtttaatggcttgacccaacttgagagt
ctgagtctctacaattgcttagtgaattcctttgacagggtcatcagtgtggacatgaag
tctctgaaatatttgtaccttcatatttcatctgagaccactgtatacaagcagttcttt
gagcccttgaacagcctaagatctgttgtcctatttgagccacgactcctctgcaactgt
gaaaactcctggttcattagctgggcaaagcaagagagccaagtgggggtgtttcctctc
tcgaagcagcacagaacactgcagtgcctaaatggaaacaggctccaggacttggacagg
tacggcctggcccactgcaggccggaggaggggtttgagcttttcatcagcaccactggc
ctccttgtgatcttcatcgtggctgttctcgtgtaccggctgcacagcaacactagaggg
cactaccgctatgatgtctttgtgtcccacagtggtgaaaatgagagctgggtcgtggag
aggctcctgcccagtctggagcagagggggcctccatttatgcacctatgcctttctagg
aaggagttccagctggggaaggatattgtggagaatataaccgacagtctctacagaagc
tgccgcaccctctgcctggtcagccgccactacctgcagagcaaccggtgctccctggag
atgcgactaggcacctacaggctgcaggtggagcacagggatgtgctcatcctggtgttt
ctggagaagatcccttctaatctgctctctgcccaccacaggctggcccgactggtcaag
accaggacttacatagactggcctcaagacccggcccagcaggaggccttctgggacata
ctgtggagcaaactagtgacagaaaaggtgttatga
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