Clupea harengus (Atlantic herring): 5228438 Help Entry 5228438           CDS       T09045                                  Symbol COX1, KEG55_p11 Name (RefSeq) cytochrome c oxidase subunit I   KO K02256   cytochrome c oxidase subunit 1 [EC:7.1.1.9] Organism char  Clupea harengus (Atlantic herring) Pathway char00190   Oxidative phosphorylation char01100   Metabolic pathways char04260   Cardiac muscle contraction Brite KEGG Orthology (KO) [BR:char00001]  09100 Metabolism   09102 Energy metabolism    00190 Oxidative phosphorylation     5228438 (COX1)  09150 Organismal Systems   09153 Circulatory system    04260 Cardiac muscle contraction     5228438 (COX1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03029 Mitochondrial biogenesis [BR:char03029]     5228438 (COX1) Enzymes [BR:char01000]  7. Translocases   7.1  Catalysing the translocation of protons    7.1.1  Linked to oxidoreductase reactions     7.1.1.9  cytochrome-c oxidase      5228438 (COX1) Mitochondrial biogenesis [BR:char03029]  Mitochondrial DNA transcription, translation, and replication factors   Mitochondrial DNA-encoded proteins    Cytochrome c oxidase     5228438 (COX1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COX1 Motif Other DBs NCBI-GeneID:  5228438 NCBI-ProteinID:  YP_001293660 UniProt:  A5PI84 LinkDB All DBs Position MT:5474..7024 Genome browser AA seq 516 aa AA seqDB search MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTA HAFVMIFFMVMPILIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEA GAGTGWTVYPPLSGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ TPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH PEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVD TRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLAN SSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLFTGYTLHSTWTKIHFGIMFVG VNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLVAVIMFLFILWEAFAAKR EVSSVELTMTNVEWLHGCPPPYHTFEEPAFVQVQAK NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt gtggcaattacacgttgatttttctcaactaatcacaaagatattggtaccctttaccta gtatttggtgcctgagcaggaatggtgggcacagccctaagtctcctaatccgtgcagaa cttagccaacctggggctctccttggagacgaccagatctataatgttattgttactgca catgccttcgtaataattttctttatagtaatgccgattctaattggagggtttggaaac tgactaattcctcttatgatcggagcgccagatatggcattccctcgaataaacaatatg agcttctgactacttcccccctcattcctcctactactagcctcctccggagttgaagcc ggggcggggaccgggtgaacggtatatcctcctctgtcaggaaatctggcccatgcagga gcatcagttgacctaaccattttttcacttcatctagcaggtatttcctctattctaggg gccattaatttcattaccacaattattaatatgaaaccacccgcaatctcacaataccaa acgcctctgtttgtctgatccgttcttgttacagctgttctacttcttctatcgctgcct gtgctagctgccggaattacaatgcttcttacagatcgaaacctaaacaccaccttcttc gacccagcaggagggggagacccaattctttaccaacacctattctgatttttcggacac ccggaagtatatattctaattcttcccgggttcggaatgatttcccacatcgtagcctac tacgcgggaaagaaagaacccttcggatacataggaatggtctgagctatgatggccatc ggactactagggtttattgtatgagcccaccacatgttcaccgtaggaatggatgttgac actcgagcatactttacatcagcaaccataattattgccatcccaaccggggttaaggta tttagctgacttgccactctccacgggggctcaatcaaatgggaaaccccacttctatga gcccttgggtttattttccttttcacagtcgggggtctaacagggattgtcctagccaat tcttcattagatatcgtactacacgacacatactacgttgtagcacacttccactacgtt ctctccatgggggccgtattcgccattatggctgcatttgtacactgattccccctattt acaggatacaccctccacagcacctgaacaaaaatccacttcggaatcatgttcgtaggt gtcaacctaactttcttcccccaacatttcctaggcctagcaggaatgccacggcgatac tctgactaccccgacgcctatactctttgaaatactgtgtcctcaatcgggtcactaatt tcactggtagcagtaattatgttcttgttcatcctttgagaagcattcgctgccaaacga gaagtatcgtccgtggaattaactatgacgaacgttgagtgactacacggatgccctcct ccctaccacacctttgaggagccagccttcgtgcaagtgcaagcaaaataa

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