Clupea harengus (Atlantic herring): 5228438
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Entry
5228438 CDS
T09045
Symbol
COX1, KEG55_p11
Name
(RefSeq) cytochrome c oxidase subunit I
KO
K02256
cytochrome c oxidase subunit 1 [EC:
7.1.1.9
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00190
Oxidative phosphorylation
char01100
Metabolic pathways
char04260
Cardiac muscle contraction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
5228438 (COX1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
5228438 (COX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
5228438 (COX1)
Enzymes [BR:
char01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.9 cytochrome-c oxidase
5228438 (COX1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA-encoded proteins
Cytochrome c oxidase
5228438 (COX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COX1
NVEALA
Motif
Other DBs
NCBI-GeneID:
5228438
NCBI-ProteinID:
YP_001293660
UniProt:
A5PI84
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Position
MT:5474..7024
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AA seq
516 aa
AA seq
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MAITRWFFSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTA
HAFVMIFFMVMPILIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEA
GAGTGWTVYPPLSGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
TPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH
PEVYILILPGFGMISHIVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVD
TRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWETPLLWALGFIFLFTVGGLTGIVLAN
SSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAAFVHWFPLFTGYTLHSTWTKIHFGIMFVG
VNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTVSSIGSLISLVAVIMFLFILWEAFAAKR
EVSSVELTMTNVEWLHGCPPPYHTFEEPAFVQVQAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtggcaattacacgttgatttttctcaactaatcacaaagatattggtaccctttaccta
gtatttggtgcctgagcaggaatggtgggcacagccctaagtctcctaatccgtgcagaa
cttagccaacctggggctctccttggagacgaccagatctataatgttattgttactgca
catgccttcgtaataattttctttatagtaatgccgattctaattggagggtttggaaac
tgactaattcctcttatgatcggagcgccagatatggcattccctcgaataaacaatatg
agcttctgactacttcccccctcattcctcctactactagcctcctccggagttgaagcc
ggggcggggaccgggtgaacggtatatcctcctctgtcaggaaatctggcccatgcagga
gcatcagttgacctaaccattttttcacttcatctagcaggtatttcctctattctaggg
gccattaatttcattaccacaattattaatatgaaaccacccgcaatctcacaataccaa
acgcctctgtttgtctgatccgttcttgttacagctgttctacttcttctatcgctgcct
gtgctagctgccggaattacaatgcttcttacagatcgaaacctaaacaccaccttcttc
gacccagcaggagggggagacccaattctttaccaacacctattctgatttttcggacac
ccggaagtatatattctaattcttcccgggttcggaatgatttcccacatcgtagcctac
tacgcgggaaagaaagaacccttcggatacataggaatggtctgagctatgatggccatc
ggactactagggtttattgtatgagcccaccacatgttcaccgtaggaatggatgttgac
actcgagcatactttacatcagcaaccataattattgccatcccaaccggggttaaggta
tttagctgacttgccactctccacgggggctcaatcaaatgggaaaccccacttctatga
gcccttgggtttattttccttttcacagtcgggggtctaacagggattgtcctagccaat
tcttcattagatatcgtactacacgacacatactacgttgtagcacacttccactacgtt
ctctccatgggggccgtattcgccattatggctgcatttgtacactgattccccctattt
acaggatacaccctccacagcacctgaacaaaaatccacttcggaatcatgttcgtaggt
gtcaacctaactttcttcccccaacatttcctaggcctagcaggaatgccacggcgatac
tctgactaccccgacgcctatactctttgaaatactgtgtcctcaatcgggtcactaatt
tcactggtagcagtaattatgttcttgttcatcctttgagaagcattcgctgccaaacga
gaagtatcgtccgtggaattaactatgacgaacgttgagtgactacacggatgccctcct
ccctaccacacctttgaggagccagccttcgtgcaagtgcaagcaaaataa
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