Corynebacterium heidelbergense: CHEID_09795
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Entry
CHEID_09795 CDS
T08908
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chei
Corynebacterium heidelbergense
Pathway
chei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHEID_09795 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chei03400
]
CHEID_09795 (pdg)
Enzymes [BR:
chei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CHEID_09795 (pdg)
DNA repair and recombination proteins [BR:
chei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHEID_09795 (pdg)
Prokaryotic type
CHEID_09795 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WCZ37484
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All DBs
Position
complement(2169293..2170123)
Genome browser
AA seq
276 aa
AA seq
DB search
MPRVAGIRVVCMPAPLEPRLPKPGRHIAALGRETPLGTKRRARKISRLLAQAYPRAEAEL
NFSNPLELLVATVLSAQCTDVRVNQVTPALFLRYPTAADYAAAQREELEALIRPTGFFRS
KATSIMGLGRAIEERHGGVVPGRLEDLVKLPGVGRKTANVVLGNAFDTPGLTVDTHLGRL
SRRWMLTRQEDPVKVEQDLAELIERRDWTVFSHRAIFHGRRICHSRRAACGACFLARQCP
SFGMVGPADPEAAMRLITSADREHLLSLAGFEGAEQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcgtggcgggcattagagtggtctgcatgcccgctccgctcgaaccccggttg
cccaagcccgggcgccacatcgccgccctcggccgggaaacccccctgggcacgaagcgc
cgtgcccggaaaattagccgcctgctggcccaggcctaccccagggcggaggcggagttg
aacttcagtaacccgctagagctgctggtggccacggtcctgtccgcccagtgcacggat
gtgcgggtcaaccaggtgaccccggcgctgttcctgcgctacccgaccgccgcagattat
gccgcagcccagcgcgaggagctggaggccctcatccggcctaccggctttttccggtcg
aaggcgacgagcatcatgggccttggccgggccatcgaggagcgccacggcggggtggtg
ccggggcgcctggaggatctggtgaagctgcccggggtcggccgcaagaccgcgaacgtg
gtcttgggcaatgcttttgacacccccggattgacggtcgatacccacctggggcggcta
tcccgccggtggatgctcacgcgccaggaggatccggtgaaggtggagcaggacttggca
gagttgatcgagcgccgggactggaccgtgttctcccatcgggcgatcttccacggccgc
cgaatctgccattcccgccgggcggcctgtggcgcctgcttcctggcccggcagtgcccc
agcttcgggatggtcggcccggctgacccggaggccgcgatgcggttgatcacctctgcg
gatcgggagcacctgttatccctggcgggttttgaaggagctgagcagtga
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