Candidatus Cardinium hertigii: DK880_00479
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Entry
DK880_00479 CDS
T05479
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cher
Candidatus Cardinium hertigii
Pathway
cher03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK880_00479 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cher03400
]
DK880_00479 (nth)
Enzymes [BR:
cher01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DK880_00479 (nth)
DNA repair and recombination proteins [BR:
cher03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DK880_00479 (nth)
Prokaryotic type
DK880_00479 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AWN81802
UniProt:
A0A2Z3LCA4
LinkDB
All DBs
Position
complement(591340..591975)
Genome browser
AA seq
211 aa
AA seq
DB search
MTKAVVNQIFQILSKANPNPTTELVYTTDFTLLVAVILSAQATDVSVNKATQELFVQYNT
PSKILALGEENLKKCIKTIGLYNSKARHIIALCKELIERHHGHIPNTFEMLIRLPGIGRK
TANVLLNVLFQKPVIAVDTHVFRVAKRIGLAQGNSVAKVEKELEQIITPPWLMHAHHWLI
LHGRYICKARNPNCNICPIKAYCAYIKSASG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagtagtcaatcaaatttttcaaattttaagtaaggccaacccgaaccca
accacagaattggtttatacaacggattttaccttattggtagccgttatattgtctgcg
caagctactgatgtatccgtgaacaaagcaacgcaagaactgtttgttcaatataatacc
ccttctaaaattttagcattaggagaagaaaatttaaagaaatgtatcaaaacgattggt
ctatataatagcaaagctaggcatatcatagcgctttgtaaggaattaatcgaacggcac
catggccatatacccaacacttttgagatgcttatacgcttaccaggtataggaagaaaa
acagctaatgtactattaaacgttttgtttcaaaaacccgttattgctgttgatacacat
gtatttagggtagctaaacggattgggctagcccaaggcaacagtgttgctaaagtagaa
aaggaactagaacaaattataacaccaccatggctaatgcatgcccatcattggcttata
ctacatggaagatatatttgcaaagcccgaaaccctaactgtaacatctgccctataaaa
gcgtattgtgcttatataaagtcagcctccggatga
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