Chitiniphilus purpureus: N8I74_11785
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Entry
N8I74_11785 CDS
T08496
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
chic
Chitiniphilus purpureus
Pathway
chic03030
DNA replication
chic03410
Base excision repair
chic03420
Nucleotide excision repair
chic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N8I74_11785 (ligA)
03410 Base excision repair
N8I74_11785 (ligA)
03420 Nucleotide excision repair
N8I74_11785 (ligA)
03430 Mismatch repair
N8I74_11785 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chic03032
]
N8I74_11785 (ligA)
03400 DNA repair and recombination proteins [BR:
chic03400
]
N8I74_11785 (ligA)
Enzymes [BR:
chic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
N8I74_11785 (ligA)
DNA replication proteins [BR:
chic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N8I74_11785 (ligA)
DNA repair and recombination proteins [BR:
chic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
N8I74_11785 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N8I74_11785 (ligA)
MMR (mismatch excision repair)
DNA ligase
N8I74_11785 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N8I74_11785 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
Nlig-Ia
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
UXY14003
UniProt:
A0ABY6DJZ0
LinkDB
All DBs
Position
2522050..2524470
Genome browser
AA seq
806 aa
AA seq
DB search
MDQTGRAAQLRRLLHQYGYEYYVLDAPSVPDAEYDRLYQELEALEAAQPELRTPDSPTLR
VGGALLPQFNPVRHALPMLSIRTETDITAGGALAFDASVRRELGLTEDDPPVEYAAELKF
DGLAISLRYEAGVLVQAATRGDGATGEEVTANIRTVRQIPLRLNGSAPAVLEVRGEVYMR
RADFERLNERQVASGGKTFANPRNAAAGSLRQLDSGITASRPLSFFAYGLGEVSAWPAQP
QTHSGVLDALAGFGLPVCAERATVAGGAALAAFHDEVALARTSLPFDIDGVVYKVNSLAL
QRELGFRTREPRWAVAHKYPAQEALTVVEAIDVQVGRTGALTPVARLAPVFVGGVNVTNA
TLHNEDEVRRKDVRIGDTVIVRRAGDVIPEVVSVVLERRPTRPAPGHDLFDAAQEPLHPA
YRLPEACPVCGSHVVRVEGETVARCSGGLICSAQRKEAIRHFAGRRMMDIEGLGERYIDH
LVEFDYVQSVADLYRLTLADFLEMKRRADERDGLTPETVLAGRVATRWAENLLEGIAASK
QPTLARFLFALGIRHVGESTAKTLADWLGSLQLVRDAPAALLQVLPDVGATVAQAIAEFF
AEPRNEAVIDQLLAHGLTIADEHPPNAALREHLFCVGMQPSPSLLVALAIPKLTAARSRQ
LAGKLESLGALARLDQAGLDALGLPAETAQALQAWLDQQEHRAQLNALDTLCQTLHGLLP
SAATAAGPLAGKTLVLTGTLPTLTRDQAAELIEAAGGKVSGSVSKKTHYVVAGEAAGSKL
AKAEELGVSVLDEAGLQQLLAGGVPG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaccggacgggcggcgcaactgcgtcgccttttgcatcaatacgggtacgag
tactacgtgctggacgcgccgagcgtgcccgatgccgagtatgaccggctctatcaggag
ctggaggcgttggaagccgcacagcccgaactgcgcacccccgattcgccgactctccgg
gtgggcggcgcgctgctgccgcagttcaacccggtgcggcacgcgctgcccatgctctcg
atccgtaccgagaccgacatcactgccggcggtgcgctggcattcgacgccagcgtacgg
cgcgagctggggctgaccgaggacgatccgccggtggaatacgccgcggaactgaagttc
gacggtctggcgatcagcctgcgctacgaagccggcgtgctggtgcaggccgccacccgc
ggtgacggcgcgaccggcgaggaggtgacggccaacatccgcaccgtgcgccagatcccg
ttacgcctgaacggcagcgccccggccgtgctggaagtccgcggcgaggtctatatgcgt
cgcgccgatttcgagaggctcaatgaacggcaggtcgcatcgggcggcaagaccttcgcc
aacccacgcaacgccgcggccggcagcctgcgccagctggattcgggcatcaccgccagt
cggccgctgtcgttctttgcctatggcttgggcgaagtgagcgcatggccggcgcagccg
cagacgcacagcggcgtgctcgatgcgcttgccggcttcggcctgccggtctgcgccgaa
cgtgccaccgtggcgggcggcgcagcgctggccgctttccacgatgaggtggcgttggcg
cgtacctcgctgccgttcgatatcgacggcgtggtgtacaaggtcaattcgctggcgttg
cagcgcgaactgggttttcgcacgcgcgagccgcgctgggcggtggcgcacaagtatccg
gcgcaggaggcactgacggtggtcgaggccatcgacgtgcaggtggggcgcaccggcgcg
ctgaccccggtggcgcggcttgccccggtgttcgtcggcggggtcaacgtgaccaacgcc
accttgcacaacgaagacgaagtcaggcgcaaggacgtgcgaatcggcgacacggtgatc
gtgcgccgggccggcgacgtgatccccgaggtggtgtcggtggtactggaacggcggccg
acccgcccggcgccgggacacgatctgttcgatgcggcgcaggaaccgctgcatccggca
taccggctgcccgaagcatgccccgtgtgcggctcgcacgtggtgcgcgtcgagggcgag
accgtggcgcgctgctcgggtgggctgatctgctcggcccagcgcaaggaagccatccgc
catttcgccggccgccgcatgatggatatcgaagggttgggcgagcgctacatcgaccat
ctggtcgagttcgactacgtgcagtcggtggccgatctctatcggctgacgctggcggat
ttcctggagatgaagcggcgcgccgacgagcgcgacgggctcacgccggagacggtgctg
gccggcagggtcgccacccgttgggcggagaacttgctcgaagggatcgccgcgagcaag
cagcccacactggcgcgctttctgttcgcattgggcatccgccatgtcggcgagtcgacc
gccaagaccctcgccgactggttgggcagcctgcaactggtgcgtgacgccccggcggcc
ctgctgcaggtgctgcccgatgtcggtgccaccgtggcccaggccatcgccgaattcttc
gccgagccgaggaacgaagctgtcatcgaccagctgctcgcccacggcctcaccatcgcc
gacgagcatccaccgaatgccgcgttgcgtgagcatctgttctgcgtcggcatgcagccg
tcaccgtcgctgctggtggcgttggccatcccgaagctgaccgccgcccgcagcaggcag
ctggccgggaagcttgagtcactgggcgcattggcacggctggatcaggccgggctcgat
gcgctgggcctgcctgccgaaacagcccaggcgctgcaggcatggctcgatcagcaggaa
caccgggcccagctgaacgcgctcgatacgctatgccagaccttgcatggcctgttgccc
agcgcagcgacggcggcagggccactggccggcaagaccctggtgctgaccggcacgctg
cccacgctcacccgcgatcaggctgccgagctgatcgaggcggccggcggcaaggtgagc
ggcagtgtgtcgaagaagacccactatgtggttgcgggcgaggcggcgggcagcaagctt
gccaaggcggaggaactgggggtgtcggtgctggacgaagccgggttgcagcagctgctg
gccggcggcgtaccgggctga
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