Colletotrichum higginsianum: CH63R_03824
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Entry
CH63R_03824 CDS
T08176
Name
(RefSeq) Ribonucleoprotein-associated protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_03824
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_03824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_03824
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_03824
Spliceosome [BR:
chig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CH63R_03824
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CH63R_03824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
28862906
NCBI-ProteinID:
XP_018160045
UniProt:
A0A1B7YI87
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All DBs
Position
3:<898271..>898801
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AA seq
149 aa
AA seq
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MADTLVAQIPQAFHHESEEVPDQSYLEPKPAALSDDLSNELYELLLLAFDQDQAVEGTTK
LYEAVSNGQAELVVCAADVVRDFSLDHMPALCESHSVLYVFVPSRYVLGQSCGFDYSISA
ATITCHEGSDLAAAITEMKEKLQENQNGM
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggctgataccttggtcgcccaaattccgcaagcattccaccatgagtctgaagaggta
ccggaccagtcttacctggaaccgaagccggcagctttgagcgacgacctcagcaacgag
ctctacgaactactgctgctggcctttgatcaagatcaggctgttgagggcaccaccaag
ctttacgaagccgtgtccaacggccaagctgagctcgttgtctgcgcagccgatgtagtc
cgagacttctccttggatcatatgccggcgctatgcgagtcccacagcgtcctctacgtg
ttcgtccctagtagatatgtcttagggcaaagttgtggattcgattattccatctctgca
gcaacgattacatgccacgagggcagtgacctggctgcggcgatcacagagatgaaggag
aagctgcaagagaaccagaacgggatgtga
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