Colletotrichum higginsianum: CH63R_04044
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Entry
CH63R_04044 CDS
T08176
Name
(RefSeq) SNF2 family domain-containing protein
KO
K15083
DNA repair protein RAD16
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_04044
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
CH63R_04044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-C3HC4_2
AAA_34
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
28863126
NCBI-ProteinID:
XP_018160265
UniProt:
A0A1B7YIT8
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All DBs
Position
3:complement(1580173..1583092)
Genome browser
AA seq
956 aa
AA seq
DB search
MAATPAPRKSASRIEIQLPTAAGLRSERALRRSQYSMAPIKRKRSDNGDGDDDDDEEYSD
NDRDASVARRLQKEENRRGSKTARLSDADLARRLQEEEYDMDEVNAPTASQQGRRSVTSA
KALATDSEDDMSEDMSFAARTKPSGQGRSRLVKKKNISFAQPPTKKQKDLSFASDDEDEL
VGSMDEDDDFDLSSEKDDSDYDFDDNPKTSTSKGKNPVRETRSTASSSAQPPATSGPSRR
DGQRQREEEDILEGQDDDLSSLSSYVTNVTDDASAAAAASTASDSDGRLQNAVRRQSRGR
RALQRGSRRRGQLERDRLEQQHPELLTMWQELEALPPLRPENIAQPKQISRQLKPFQLAG
VAWMIAMEQSDYKGGLLGDEMGLGKTIQAVSLIMSDFPCKKPSLVLVPPVALMQWQSEIA
SYTDGTLKTFVYHGSLSKAKNVSLKELKKFDVIMMSYNSLESMYRKQEKGFARKDGIYKE
KSLIHQIDFHRIILDEAHCIKTRTTMTAKACFALKTTFRWCLTGTPLQNRIGEFFSLIRF
LQVKPFASYFCKQCPCSTLDWDLDEDHRCRRCHHIGMQHTSVFNQELLIPIQKWGNRGEG
ADAFRKLRTMTDRIMFRRLKKDHTDSMELPVKEIYVDRQFFGEVENDFANSIMTNGQRKF
DTYVAQGVLLNNYANIFGLIMQMRQVADHPDLILRKNGEGGQNTLMCNLCDEVAEDCIRS
RCKHDFCRACARTWLAANDQPDCPQCHILLAIDLEQPEIEQNEADVKKSSIINRIKMEDW
TSSSKIELLVHELHKLRSDNASHKSIIFSQFSSMLQLIEWRLRRAGITTVMLDGSMNPAQ
RQASINHFMTKIDCECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQ
TRPCTITRLCIEDSVESRMVLIQEKKTSMINSTVNADDKAMESLSPEDMQFLFRGS
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacgcctgctccccgcaagtcggcctccaggattgagatccagctccccact
gctgctggtctccggagtgagcgtgctctgcgtcgcagccagtactccatggcgcccatc
aagcgcaaacgatccgacaatggagacggcgatgacgatgacgacgaagagtactccgac
aatgatcgcgatgccagtgtcgctcgccgtctgcaaaaggaggagaatcgcagaggttcc
aaaactgctcgactttcagatgccgaccttgccagacgcctccaggaagaggagtacgat
atggacgaagtcaatgccccaaccgcttctcaacaaggccgacgcagcgtgacttctgcc
aaagccctcgccacagatagtgaagacgatatgtcggaagacatgtcctttgctgctcga
accaaacccagcggtcaaggccgtagcaggcttgtcaagaagaagaacatctcttttgcg
cagccacccacaaagaagcagaaggacttgtcttttgcctctgacgacgaggatgaactg
gtgggttctatggacgaggatgatgactttgacctgtcgtcagagaaagacgattcggac
tacgactttgacgacaaccccaagacgtcgacgagcaagggcaagaatcctgttagagag
accagatccacggcttcctcctcagcacagccgcctgcgacatcaggtccgtcaaggcgg
gacggacaaaggcagagggaggaggaagacattctggaaggccaagatgatgatctttca
agcctttcgagctacgtcaccaatgtcactgacgacgcttcagccgctgcggccgcctcg
accgcgtccgatagtgatgggcgtcttcagaacgccgtacgtaggcagtcccgtggtcga
cgcgcccttcaacgtggctctaggcggcgaggtcagctcgagcgtgacagactggaacag
cagcaccctgagcttctgaccatgtggcaggagcttgaggctttgccgcctctgcgaccg
gagaatatcgcccagcccaagcaaatctcgcgccagctcaagcctttccagcttgcaggc
gttgcgtggatgattgccatggagcagtccgactacaaaggcggcctcctcggcgatgag
atgggccttggcaagaccattcaggcggtgtctctgataatgtcggatttcccctgcaag
aagccatctctagtcctggtccctcccgtcgccttgatgcagtggcagtccgagattgcc
tcctacactgacggcacgctcaagacattcgtctaccacggttccctgtccaaggcaaag
aacgtaagccttaaggagctgaagaaattcgatgtcattatgatgtcctacaacagtctg
gagtcgatgtaccgcaaacaggaaaagggcttcgctcgcaaggacggcatctacaaggag
aagagtctgatccaccagatcgacttccatcgcatcattctcgatgaggctcactgcatc
aagaccaggaccaccatgacggcaaaggcctgcttcgccctcaagacaaccttcagatgg
tgcttgactggcacaccgctccagaaccgcattggcgagttcttctctttgatccgcttc
cttcaggtcaagcccttcgcttcgtacttctgcaagcagtgcccctgctctactttggac
tgggacctcgacgaggatcacagatgccgtcgttgccatcatatcggcatgcagcatact
tccgtgttcaaccaggaactactcattccgattcagaagtggggcaaccgcggagaaggt
gcagatgccttccggaagctccgtacgatgaccgaccgcatcatgtttcgccgcctgaag
aaggatcacactgattccatggagcttccagtcaaggagatctatgtcgatcgtcaattc
tttggtgaggtggagaacgactttgcgaacagcatcatgacgaacgggcagcgcaagttc
gacacctacgtcgctcagggtgtgttgctcaacaattacgccaacatctttggtctcatt
atgcagatgcgccaggttgccgatcatcctgatctgatcctccggaagaatggcgaaggc
ggccagaacacgctcatgtgcaacctatgcgacgaagtcgccgaggattgcatcaggagc
cgttgcaagcacgacttctgccgcgcctgtgctagaacgtggctcgcggccaacgatcaa
cccgactgtccccagtgccacatcctcctggccatcgacttggagcaacccgagatcgag
cagaacgaggctgatgtcaagaagtcatcgattatcaatcgaattaagatggaggattgg
acttcgtcgtccaagattgagcttctcgtccacgagctccacaagcttcgctccgacaac
gcgtcccacaagtctatcatcttctcgcagttctcgtccatgcttcaactcatcgagtgg
cgtctccgccgtgctggtatcaccactgttatgctggacggtagcatgaaccctgcgcaa
cgtcaagcgtccatcaaccactttatgaccaagattgactgcgagtgctttctcgtatct
ctcaaggctggcggtgttgccctgaacctcacggaggcgtcgcgcgtcttcatcgttgac
ccctggtggaaccccgcggccgagtggcagtcggctgaccgatgccaccgcatcggccag
acacgcccttgcactatcacccgtctctgcatcgaggactcggtcgaaagccgcatggtg
ctgatccaggagaagaagaccagcatgattaactccactgtcaacgctgacgataaggcc
atggagtcactgagcccagaggatatgcagtttctcttccgtggatcttga
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