KEGG   Colletotrichum higginsianum: CH63R_04159
Entry
CH63R_04159       CDS       T08176                                 
Name
(RefSeq) ATP dependent DNA ligase
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
chig  Colletotrichum higginsianum
Pathway
chig03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CH63R_04159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_04159
Enzymes [BR:chig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CH63R_04159
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CH63R_04159
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase
Other DBs
NCBI-GeneID: 28863241
NCBI-ProteinID: XP_018160380
UniProt: A0A1B7YIG3
LinkDB
Position
3:complement(1990080..1993373)
AA seq 1013 aa
MPLSFVLVCDLLEEARKHATSGNKNLNQRVSDWFTRHRRHVDDAGTDVSALLSTLLPDKR
TDRVYAIQTDTLSNIIGRALRLGASRVKELRRYKEPGRGEDLADCVARLLKETPNPMFAG
KNAVTVEEIDSVLNNLAASCRFSSPAVRALPPLSTSRDELLGSLYFRMQAREAKWLTRLI
LKNFQPVMLDPGHVYYCCDPLLPNILRVRDDFSAALSLLQDLRRLRREPSFRRGMGEKGE
ALMKHLTPVLGVKVGRPFWLKGRSIKHCIQLGHGRMSCEKKMDGEYCQIHVDLSKGFKCI
QIFSKSGKDSTNDRAALHGAIRDSLNIGRTNCKLARGCILEGELVVYSDKEQKILPFHKI
RKYVTRSGSFLHTEADSQRHDYEHLMIIYFDALLIDGESLLGVRQNERFERLTDLITCRK
GRAALVEHQIISFDHSLGPHHLRKAFAKSIAAREEGLVLKPDDPYFDFNKNHRPLSGCPI
KLKKEYIGGFGDVGDFAVVAARYDVDQAKCYSIPNLQWTHFYLGCLENKEDVQRCQAQPE
FTVVHQVELNETLLKMVVAYGNPLPVPFEDNDALILNIAPGIAQQKMPSMVFTEPLVFDV
RCFSFDKEGNTGFWQPRFPQVSKVHFDRSFIDTISFLELQSIAKDATTAPAMEDSQEMLD
WIARLEGADPRGIPVDAASQSTTTSLMTPSRDSSIRPSNSPAPSPAQSSLKSRRSLPALL
EAPESVLTTAPTTTSGTADIMADATGDSPTSEASQVPNKNKREPEGKDACPRKRARLRSE
PGPIAQGSPRSTRQPLADMSINQTTPSPHASQTQPPTAKQDEMDNKATKPVAPVSVELSK
KSMEDAMLIPESPAPSAPKPFAAAQKHVCQHAGDNCPFANTTVLLSSCIAQQAWITENLL
PIHGIREWTTDPQDWVGDPASSRSSPPDPNIQKRKRRPRKICFVEHNRKEATRALLMRLE
NSPQYTPSGRREYVEVYDWRILEDMTALEKVFKGSKPSAEHPDPKRKWWVGLA
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgcccctttcttttgttctcgtatgcgatctgctagaggaggctcgtaaacacgccaca
tccggcaacaagaacctcaaccaacgcgtgtccgactggttcacccggcaccgccgccat
gtcgacgacgctgggactgatgtctctgcactgctatctaccctccttccggacaagcgc
accgatcgagtgtatgcgatccagaccgatacgctgtctaacatcatcggccgagccctg
cgtcttggggcgtcgcgcgtcaaagagttgcgccgatataaagagcccggccgaggcgag
gatctggctgactgtgttgcgagactcctcaaagaaacaccgaaccctatgtttgccggg
aagaatgcggtaactgttgaggagatcgattcagtcctgaataacctcgccgcctcctgt
cgattcagctcacccgctgttcgagccttgccgcctctttcgaccagtcgggacgaactc
ctcggcagcctgtacttccgcatgcaagcgagagaagccaagtggctcacccgcctgatt
ctcaaaaacttccaacccgtcatgcttgacccgggacatgtgtactactgctgcgacccc
ctgctccctaatattttgagggtccgagacgacttttctgcagcactgtctcttctgcag
gatctgaggagactcaggagagaaccctcgtttcgcaggggcatgggggaaaagggggag
gcactgatgaagcacttgacacccgtcttgggcgtcaaagtcggcaggccattttggctg
aagggtcgtagtatcaaacattgcatccaactcggccacggtcgcatgagctgcgagaag
aagatggacggggagtactgtcagatccacgtagatttgagcaaaggattcaagtgcatc
cagatcttctccaagagcggcaaggacagcaccaacgaccgtgccgcgttgcatggagca
atccgagactctctgaacattggaaggaccaactgcaaactcgctcgtggttgtattctg
gagggggagttggtggtttacagtgacaaggagcagaaaatcttgccgtttcacaaaata
cgtaaatacgttacgaggtctggcagcttcctccacactgaggcagattcacagcgccac
gattatgaacaccttatgatcatctacttcgatgctctactcatcgacggagagtctctt
ctgggcgtccgccaaaacgagcgctttgaaagacttacagatctgattacctgtcgaaag
ggccgtgccgcgctggtagaacatcaaatcatcagcttcgaccattctcttgggccacat
catttgagaaaagcgtttgccaagtcgatcgcagcacgagaggaaggcctggtactgaag
cccgacgacccctatttcgacttcaacaagaaccaccgcccactttctggttgccccatc
aagctgaagaaggagtacattggcgggtttggtgatgtgggcgactttgctgtcgttgcg
gcgcggtacgacgtggaccaagcaaagtgctacagcatcccgaatctccagtggacgcac
ttctacctggggtgtctcgaaaacaaggaggatgtccagaggtgtcaggcccagcctgag
ttcacggtggttcaccaggtagagctcaacgagaccctgctcaagatggtggtggcatac
ggcaatccactgccagttccttttgaggacaatgacgccttgatccttaacattgcgcca
ggcattgcccaacaaaagatgcccagcatggtctttaccgaacctttggtgtttgatgtc
cgttgcttctcgtttgacaaggagggaaacacaggcttctggcagccaaggttcccgcag
gtgtccaaggtgcactttgaccggtcttttattgacaccatctccttcttggaactccag
tccattgccaaggacgcaactacagcaccggctatggaggacagtcaggagatgcttgac
tggattgctagactggaaggagccgatcctcggggaatccccgtcgacgccgccagtcag
tcaacgaccacatccttgatgaccccgtctcgggattcgtcaatccgaccgtcgaattcg
ccagctccatctcctgcacagagctcactgaaatcccgtagatctcttccggcgttgttg
gaagctccggagtccgttctcaccacagccccgacaactacatcaggtacagccgacatc
atggccgatgccactggagactctccgaccagcgaagcatcacaggttcccaacaaaaac
aaacgggaaccagagggaaaagacgcgtgtccgcgcaagcgtgcgaggcttcgctcggag
cctggtcccatcgcccaaggatccccccgatcaacgcgtcagcctctcgcagacatgagc
atcaaccaaacgaccccttctcctcacgcctctcaaacccagccgccgacggcgaagcag
gacgaaatggacaacaaagcgacgaagcccgtcgctcccgtctctgtcgaattgagcaag
aagtctatggaagatgccatgctaatccccgagtcgcccgctccgagcgcaccaaagccc
ttcgcggcagcgcaaaagcatgtatgccaacacgccggcgacaactgccccttcgccaac
accacagtactcctctcctcctgcatcgcccaacaggcctggatcacggaaaatctcctc
cccatccacggcatccgcgaatggacgacagacccgcaagactgggtcggcgatcccgcc
tcatcccgatcatcacccccggatccaaacatccagaagcgcaagcggcgtccccgcaag
atctgcttcgtcgagcacaatcgcaaagaagcgacccgcgctttgctgatgcgcctcgag
aacagcccgcagtacacgcccagcggcaggcgcgagtacgtcgaggtctacgactggcgg
attctggaggatatgactgctctggagaaggtcttcaaggggtcgaagccctcggccgag
cacccggaccccaaacgaaagtggtgggttggcttggcttag

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