Colletotrichum higginsianum: CH63R_08739
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Entry
CH63R_08739 CDS
T08176
Name
(RefSeq) Ribonucleoprotein-associated protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_08739
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_08739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_08739
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_08739
Spliceosome [BR:
chig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CH63R_08739
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CH63R_08739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
28867820
NCBI-ProteinID:
XP_018155736
UniProt:
H1VBP0
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All DBs
Position
6:<1056773..>1057208
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AA seq
125 aa
AA seq
DB search
MADQSAAWPLADDALQQEILDLVQQCQHYRQLKKGANEATKTLNRGVSELIILAADTNPL
SIVLHLPLLSEDKNVPYVYVKSKTALGRACGVSRAVIAASITSNEGSELAGPIRALRDKI
ERLAI
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaatccgctgcctggcccttggccgacgatgctcttcagcaggagatcctg
gacttggtccagcagtgccagcactaccgccagctgaagaagggcgccaacgaagccacc
aagaccctcaaccgtggtgtctccgagctcatcatcctcgcggctgataccaaccctctc
agcatcgttcttcacctgcctctcctctctgaggacaagaacgttccctacgtctacgtc
aagtccaagaccgcccttggtcgtgcctgtggtgtctctcgcgctgtcattgctgccagc
atcacctccaacgagggcagcgagctcgctggacccattcgcgctctccgcgacaagatc
gagagacttgccatctaa
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