KEGG   Colletotrichum higginsianum: CH63R_11366
Entry
CH63R_11366       CDS       T08176                                 
Name
(RefSeq) SMB protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_11366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_11366
   03041 Spliceosome [BR:chig03041]
    CH63R_11366
   03032 DNA replication proteins [BR:chig03032]
    CH63R_11366
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CH63R_11366
Spliceosome [BR:chig03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CH63R_11366
  U2 snRNP components
    CH63R_11366
 Complex B
  U1 snRNP components
    CH63R_11366
  U4/U6.U5 tri-snRNP components
    CH63R_11366
 Complex C
  U2 snRNP components
    CH63R_11366
DNA replication proteins [BR:chig03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CH63R_11366
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 28870447
NCBI-ProteinID: XP_018153181
UniProt: A0A1B7XY09
LinkDB
Position
8:1339128..1340086
AA seq 227 aa
MLNKQGKMAGYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKIRQNKPAAP
GASAPSGQTIEKEEKRTLGLTIVRGAHIVSLSVESEPPADPSARLGKSAPGGISSTLTAG
PGVARPAGRGAAPAPPSLAGPAAGVGGGAPPGFPGFPGAPPFGGRGGMLPSPRDPRTRFS
HLAAPPPGFPGAFPPPGFPQNAPFPPPGFNPGGPPGGAPGFNPPPRR
NT seq 684 nt   +upstreamnt  +downstreamnt
atgttgaacaaacagggcaagatggccggttacatcaactaccggatgagagtcacgttg
aacgacggccgccagatgacgggacagatgcttgctttcgacaagcacatgaaccttgtc
ctcgccgacaccgaagagtttcgacgcgtcaagatccgccagaacaagcccgccgctcct
ggagccagcgcaccctcaggtcaaacgattgagaaggaggagaagcgaacccttggtttg
acgattgtccgtggcgcccacattgtttcgctgtcagtcgagtcagagcctcccgcggat
cccagtgcgagactcggaaagagtgctccgggcgggatctcctcgaccctcaccgccggc
cctggtgttgcgcgacccgccggtcgcggtgctgctccggctcccccatctctggctggc
cccgctgccggtgttggaggtggtgctcctcccgggttccctggtttccccggtgcaccg
cccttcggcggacgtggaggtatgcttcctagcccccgtgacccccgaacgcgattctca
cacctagcagctcctcccccaggctttcctggtgcgttcccgcccccgggatttccgcag
aacgccccctttcctcctccgggcttcaaccccggcggcccccccggtggagcccctggc
ttcaaccctcccccccgaagatag

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