Colletotrichum higginsianum: CH63R_11366
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Entry
CH63R_11366 CDS
T08176
Name
(RefSeq) SMB protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_11366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_11366
03041 Spliceosome [BR:
chig03041
]
CH63R_11366
03032 DNA replication proteins [BR:
chig03032
]
CH63R_11366
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CH63R_11366
Spliceosome [BR:
chig03041
]
Complex A
U1 snRNP components
Sm proteins
CH63R_11366
U2 snRNP components
CH63R_11366
Complex B
U1 snRNP components
CH63R_11366
U4/U6.U5 tri-snRNP components
CH63R_11366
Complex C
U2 snRNP components
CH63R_11366
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CH63R_11366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28870447
NCBI-ProteinID:
XP_018153181
UniProt:
A0A1B7XY09
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All DBs
Position
8:1339128..1340086
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AA seq
227 aa
AA seq
DB search
MLNKQGKMAGYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRRVKIRQNKPAAP
GASAPSGQTIEKEEKRTLGLTIVRGAHIVSLSVESEPPADPSARLGKSAPGGISSTLTAG
PGVARPAGRGAAPAPPSLAGPAAGVGGGAPPGFPGFPGAPPFGGRGGMLPSPRDPRTRFS
HLAAPPPGFPGAFPPPGFPQNAPFPPPGFNPGGPPGGAPGFNPPPRR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaacagggcaagatggccggttacatcaactaccggatgagagtcacgttg
aacgacggccgccagatgacgggacagatgcttgctttcgacaagcacatgaaccttgtc
ctcgccgacaccgaagagtttcgacgcgtcaagatccgccagaacaagcccgccgctcct
ggagccagcgcaccctcaggtcaaacgattgagaaggaggagaagcgaacccttggtttg
acgattgtccgtggcgcccacattgtttcgctgtcagtcgagtcagagcctcccgcggat
cccagtgcgagactcggaaagagtgctccgggcgggatctcctcgaccctcaccgccggc
cctggtgttgcgcgacccgccggtcgcggtgctgctccggctcccccatctctggctggc
cccgctgccggtgttggaggtggtgctcctcccgggttccctggtttccccggtgcaccg
cccttcggcggacgtggaggtatgcttcctagcccccgtgacccccgaacgcgattctca
cacctagcagctcctcccccaggctttcctggtgcgttcccgcccccgggatttccgcag
aacgccccctttcctcctccgggcttcaaccccggcggcccccccggtggagcccctggc
ttcaaccctcccccccgaagatag
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