Chitinophaga agri: GWR21_17480
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Entry
GWR21_17480 CDS
T06416
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_17480
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_17480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_17480
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_17480
Transporters [BR:
chih02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GWR21_17480
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR21_17480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QHS61323
UniProt:
A0A6B9ZL32
LinkDB
All DBs
Position
4409062..4412175
Genome browser
AA seq
1037 aa
AA seq
DB search
MSLPSLSLKRPVFAIVMNIIIVIFGLVGFNFLGVRDFPAIDPPIVNVRTSYAGANSDIIE
TQITEPLEKSINGIAGIKNISSSSSQGTSNITVEFELSIDLEAAANDVRDKVSQALRSLP
PDIDAPPVVSKEDANSDYILSMTVQSNIRNQLEVTEYANNVLLERLQTIPGVSSIRILGE
KKFAMRLWMDPARLSAYSLTPTDVQAALAKENVELPSGKIAGNATELTVRTFGRLNTEED
FNNLIIKNENGNVIHFRDIGQAVLGPENEETILKESGVPMIALALTPQPGSNYVAITDEF
YKRYDQLKRDLPDDITTNIAIDNTKFIRKSIEEVEETLIVALGLVIIIIYLFFRDWLMAF
RPLVDIPVSLIAAFFIMYICGFTINILTLLAIVLATGLVVDDGIVVTENIYKKIEAGMPR
MKAAKEGSEEIFFAVIATSITLAFVFLPIVFLQGFVGRLFREFGIVVAGAVLISAFVSLT
LTPVLNVKLGRKTHKHSWFYEKTEPFFTGMESGYQRALEGFMKIRWIATLIIMACLAMIW
FIFENLQSELAPIEDRSQFRLSISAPEGTSFDYMESYMNRLTDFMNDSIPEKKILITVTS
PGFGGGAVNSGFANVVLSEPNERYRSQKEIVNMVNRNMFRFPEGKVFAIEQQTIQVGRRG
GLPVSFVLQHINFDSLSSVLPKFIDEANNNPTFGAVDVDLKFNKPELRIQINRAKASELG
VSVDDISQTLQLALSNLRYGYFIRNGKQYQVMGQVYRGARDKPTDLQNIYVRNSRGEAIQ
LDNVVTIEEETSPPIIYHFNRYKSATISASLAPGKTIGDGIKAMYGIYDKLKQQGVLNDN
YVSALAGSSRDYAESGSNTMFALVLALVLIYLVLAAQFESWVDPFIIMLTVPLAFAGALL
SLWIFGQTWNIFSQIGVIMLIGLVTKNGILIVEFANHKRDEGMSRSKAVIEASAMRLRPI
LMTSLAMALGALPIAMSLGAAATSRIPLGIVIVGGIVFSLILTLFVIPAMYTFLSRRKPA
SERMNEEEEEETVKVHA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttccttcgctatctcttaaacgtcccgtatttgccatcgtaatgaatatcatt
atcgtgatattcggcctggtgggattcaacttcctcggggtaagggacttccccgctatc
gacccgcctattgtgaacgtgcggacttcatatgccggcgcaaactctgatattatcgaa
acccagatcaccgaaccgctggaaaaatccatcaatggtatcgcgggtatcaaaaatatt
tcttccagcagcagccagggtaccagtaatattaccgtcgagttcgaactgagtattgac
ctcgaagctgccgccaacgatgtacgtgacaaagtatcacaggcactccgtagccttcct
ccggatattgatgctcctcctgttgtgtcaaaagaagatgcaaactctgactatatcctg
tctatgacggtacagagtaacatccgtaatcagctcgaggtgactgaatatgccaacaac
gtattactcgaaagactccagaccatccccggtgtcagctccatccgtatccttggtgaa
aagaaatttgccatgcgcctatggatggatcccgcccgcctgtcggcctacagtctgacg
cctacggatgtacaggccgcgcttgccaaagaaaacgtggaactgccttccggaaagatt
gccggtaacgcaacagaactaacggtgcgtaccttcggccgcctgaacacagaagaagac
ttcaataacctcattattaaaaatgagaatggtaatgtgatccatttccgggatatcgga
caagctgtactcggacctgaaaacgaagaaaccattctgaaggaatctggtgttccaatg
atcgcactggcactcactcctcagccaggttccaactatgtagctattactgatgagttc
tacaaacgttacgaccagttgaaaagagaccttcctgatgatatcaccaccaatattgct
atcgacaatactaagttcatccgcaagtccatcgaggaagtagaagaaacactgatcgtc
gccctgggtttggtgatcatcatcatctacctcttcttccgtgactggctgatggccttc
cgtccgctggtggatattcctgtgtcactgatcgctgcattcttcattatgtatatctgc
ggctttaccatcaacatcctcacgctgctcgctattgtactggctacaggtcttgtggtg
gatgatggtattgtggtcacggaaaatatttacaagaaaatagaagcgggcatgccgcgt
atgaaagcggcaaaagaaggttctgaagagatattctttgctgttatcgcaacctctatc
acactcgcatttgtattcctaccgatcgttttcctgcagggcttcgtcggacgactattc
cgcgagtttggtatcgtggtagcaggagcagtattaatatctgcttttgtatcattgacg
ctgacgccggtactgaacgtaaaactgggtcgtaaaacacataagcattcatggttctat
gaaaagacagagccattcttcactggcatggaatccggctatcagcgtgccttagaagga
tttatgaagattcggtggatagcgacgctgatcatcatggcctgtctggcgatgatctgg
ttcatcttcgagaacttacagtctgagctggccccgatcgaagatcgtagtcagttccgt
ctttctatcagtgcacctgaaggaacttcgttcgattacatggaatcttacatgaatcgt
ctgaccgacttcatgaacgattctattcctgaaaagaagatcctcattacagtgacttct
ccaggcttcggcggtggtgccgttaactccggctttgcaaacgttgtgctgagtgagccg
aacgaacgttaccgttcacagaaagagatcgtgaacatggtgaaccgtaacatgttccgc
ttccctgaagggaaggtgttcgctattgagcaacagacgatccaggtgggacgccgtggt
ggtctaccggtatcgtttgtattgcagcatatcaacttcgatagtctatcatccgtactg
cctaagttcatcgacgaggcaaacaataatccaacctttggtgcggtggacgtagacctg
aagtttaacaaaccggaactccgtattcagatcaaccgcgccaaagccagtgagttaggc
gtttctgtagatgatatctcacaaactttacagctggcattaagtaacctgcgctatggc
tactttattcgtaatggtaaacaataccaggtaatgggacaggtgtatcgtggtgcacgt
gataagccaactgacctgcagaacatttatgtgcgtaacagccgtggtgaagcgatccag
ctcgataacgttgtaacgatcgaagaagaaacgagtcctccgatcatctaccacttcaac
cggtataaatctgctacaatctctgcgagccttgcacccggcaagacgatcggagatggt
atcaaggcgatgtatggtatttatgacaaactgaaacaacagggcgtattaaatgataac
tatgtatctgcactggccggttcttcccgtgactatgcagaaagtggttccaataccatg
ttcgcactggtactcgcactggtactgatctacctggtactggccgcgcagtttgaaagc
tgggtcgatccgtttatcatcatgctgacggtaccgctggcgtttgcaggagcgctgtta
tcattgtggatatttggtcagacatggaacatcttctcacagattggtgtaatcatgctg
ataggtctcgtaacaaagaacggtatcctgatcgtggagtttgcgaaccacaagcgcgat
gaaggcatgtccagaagcaaagctgtaattgaagcatccgcgatgcgtttgcgtcccatc
ctgatgacaagccttgccatggccctgggtgcgctgcctattgcgatgtcactgggagcg
gctgctaccagccgtattccattgggtatcgtgatcgtgggtggtatcgtattctcactg
atactgacactatttgtaattccagctatgtataccttcctgtccagaagaaaacctgcg
tcagaaaggatgaatgaagaagaagaagaggagaccgtcaaggtgcatgcataa
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