Chitinophaga agri: GWR21_27930
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Entry
GWR21_27930 CDS
T06416
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_27930
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_27930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chih03036
]
GWR21_27930
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_27930
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_27930
Chromosome and associated proteins [BR:
chih03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GWR21_27930
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_27930
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR21_27930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF6003
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QHS63276
UniProt:
A0A6B9ZMP7
LinkDB
All DBs
Position
complement(6979333..6980475)
Genome browser
AA seq
380 aa
AA seq
DB search
MYHPYTNNMNSLKALAITISLPATLLFSSCGHTEGKSAKKGENTQEEAAVAAISLQKGKL
TSSLQIPGELIAYQNVDIYAKVNSFIKKLHVDVGSEVSQGQLLATMEAPEISSQLAGAES
RIKSQEAVYLASKANYDRLYNTSLTPGTVSKNDLDIAQARMKSDLAQWESGKAAYREIAD
NRNYLEIRAPFAGVISAKNVSVGAYVGPSGKGSEYPLFSLQEQKKLRLVISVPEAYTSYL
SNNSEVKFNVKAFTGKSFTAKVNRLSGALDTRLRSQRIEMDVINNDKKLLPGMIAEVNIP
MDAADSTFIVPKAAVVNSTLNVFVIRVTNGKAERVQVQTGRDADGKVEIYGNLNEGDTIL
ASANEEIREGAELKHVKIGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatccttacacgaataatatgaacagtcttaaagcactcgctatcacaataagt
ttacctgccacactacttttcagcagctgcggtcatacagaaggtaaatcagcaaagaaa
ggagaaaacacacaggaagaagcagctgtagcggccatatcactgcagaagggtaagctg
acctcttccctgcaaatacctggtgagctgatcgcttaccagaatgtagacatctatgcg
aaggtgaatagtttcatcaagaagctgcatgtggacgtagggtcagaggtaagtcagggg
cagctgctggctacgatggaagcaccggagatcagctcacagctggctggtgcagaatcc
aggatcaaatcgcaggaagcggtatacctggccagcaaagccaactacgaccgcttgtat
aataccagtctgacaccaggcaccgtatctaaaaacgacctggacattgcacaggcacgc
atgaaatcggacctggcacagtgggagtccggtaaggcagcttaccgggagatcgctgac
aacaggaactacctggagatcagagcgccatttgcaggcgttataagcgcgaaaaacgta
agcgtgggcgcctatgtcggcccaagcggaaaaggctctgaataccctttattttcccta
caggagcaaaagaaactgcgtcttgtgatctccgttccggaagcctacaccagttacctg
tctaataacagcgaagtgaagttcaatgtaaaggcatttaccggtaagagctttaccgcg
aaggtgaatcgtctgtccggtgcactggacacgcgtctgcgttcccagcgtattgaaatg
gatgtgatcaacaatgataagaaactgctgccgggcatgatcgcagaagtgaatattccg
atggatgcggctgacagtacattcattgtaccgaaagcagcagtggttaattctacttta
aatgtatttgtgatcagggtgacaaatggcaaagctgaaagagtgcaggtacaaaccggt
cgcgatgcagatggcaaagtggaaatctatggaaatctcaacgaaggcgacaccattctg
gctagcgcaaacgaagaaataagagaaggcgctgaactgaagcacgtaaaaattggcaag
taa
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