Chitinophaga agri: GWR21_28220
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Entry
GWR21_28220 CDS
T06416
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_28220
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_28220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chih03036
]
GWR21_28220
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_28220
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_28220
Chromosome and associated proteins [BR:
chih03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GWR21_28220
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_28220
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR21_28220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Lambda_ea8_5
ATG14
Motif
Other DBs
NCBI-ProteinID:
QHS63333
UniProt:
A0A6B9ZQL4
LinkDB
All DBs
Position
7087647..7088705
Genome browser
AA seq
352 aa
AA seq
DB search
MKARYITIIIVIAIVGLIVFKLAANKRKLNEKNTPAPVAAVRIPVKVAKVTEQLFEISIL
KTGNLAPFKEAKAVAMSGGTLLKVNFELGDKVKQGQVLAVTDTRLAQLELQKAETNVMKL
RNDLNVYTELLAGKAATQEKVNEIRQNYENAVNQVQQAKKNVADAAILAPTSGVIASKKV
EQGMFVNAGTELASIVNLSRAKVQVNLTEAEVYKVKEGQQVKITTDVYPGKTFNGAISFI
SPQADDAHNYLVEILIGNEEDALLRSGTFVYVDFSRKTEQQVLVIPRDALTESVKDASVY
VLQDSIVRQRTIQTGADVNGMVQVLSGLKAGEQVVTSGQINLKDGSTVSVSK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccagatatattaccatcattattgtcatagcgatcgttggactgatcgttttt
aaactcgctgcgaataagcgaaaactgaatgaaaagaatacaccggcgcccgttgccgca
gtacgtattcctgtaaaggtggcgaaagtgaccgaacagctgtttgagatcagcatactc
aaaacaggtaacctggcgccatttaaagaagccaaagcagtggccatgtcaggtggcacc
ttgctgaaagtcaactttgagctgggtgataaagtaaaacagggacaggtcctcgcggtg
actgatacccgtctcgcgcaactggaattacagaaggcagagaccaatgtaatgaagctg
cgtaatgacctgaacgtgtacactgagttgctcgccggaaaagctgcgacacaggaaaag
gtgaatgagatcagacagaactatgaaaatgcagtgaaccaggtacagcaggcgaagaag
aatgtggcagatgccgctatcctcgcgcctaccagtggtgtgatcgcttccaaaaaagta
gaacagggcatgttcgtgaatgcgggtacagaactggcttctattgtcaatctgtcgcgt
gcaaaggtgcaggtgaacctgacggaagcagaggtatataaagtgaaagaaggccaacag
gtgaagatcaccacagatgtatatccgggtaaaacattcaatggtgctatcagctttatc
agtccgcaggcggatgacgcgcataactacctggtagagatcctcattggcaacgaagaa
gatgcactgctcaggtccggtacttttgtgtatgttgatttctccagaaaaacagaacaa
caggtactggtgatcccaagagatgcactgacagaaagtgtgaaagatgcttccgtatac
gttttgcaggatagcattgtacgtcagcgtacgatacagaccggcgccgatgtgaacgga
atggtacaggtgctcagtggcctgaaagcaggtgagcaggtggtgacatctggtcagatt
aatttaaaggatggtagcactgtcagtgtctccaaataa
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