Chitinophaga agri: GWR21_29295
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Entry
GWR21_29295 CDS
T06416
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_29295
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_29295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_29295
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_29295
Transporters [BR:
chih02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GWR21_29295
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR21_29295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QHS63530
UniProt:
A0A6B9ZM65
LinkDB
All DBs
Position
complement(7429893..7432925)
Genome browser
AA seq
1010 aa
AA seq
DB search
MIGYFINRPVAILVLFAALMAFGLVLIFQVPVSLLPAIDVPRMIVKVNFPNASARQVEDQ
VLKPIREQLSLVDDLTGLHSEASNHLGTVYLDFDYRANMSLAYIEVNEKMDRLLGRLPPD
MPRPQVVRINTSDIPVVRIQVVPVSDATYQEVSDLTEKVLKRRLEQLPGVSVVDMNGQRG
TVAILKPDRDRMNAFGITTSALLEAVRLSNMEIGGLNLKDGQYQYFIRLENQVRTVSDLG
NVSVKGLSGQPVQLKEIASVEMDTDQLTGYHLYNGKPGVVVTVQAQAKSRMNELLPMIRS
LVSAFQKQYPQARFNISQDQSFLLDAGIDNVKQDIILGGALTIGLLFLFLGNWASPVLMS
ISIPISLLITFIFFQLFGLSFNIISLSGLALGIGMLIDNSIVVIGEITRKRIAGLSVTDS
AIRGTNEMAVPVISQVLTTVVVYAPLVILNGLSGALVMDQSIALTISLFVSLLVAFVLTP
VLYKLLLKSPPERLKQDTVFYTFVRNRYHSMISFVLLKRKLFFAITLLVIALGVGLAFFI
PFESLPAIEKKESLIKISWNEPLDLQENKARSLALIAKLSPVVAVSESDVGATQYIFQQD
GTTIYQANVYYECASEKEKLLADRMVKQQLVRYPKCTFNILDAPNAFTQLFVNDEPYVRV
KFKPLVKGGSAQNLDILTDWLKVNRVQYAPEPSMMREPAMRGVLDMEAMNRYQINRAEID
QQLQVLFGSAEAGAVDATGDKTRVLVTEASGSVEEKLDAVVRNSEGIAYPIRKFIRFEPV
LQFSAISADKDGTYRSIALSEQPDIKAILNEITAEARSLGYDVDFTGKYFENRQLMRQLS
LIFLIVLVMLYTVLAIQFESFVQPVIVMLTIPLGVAGACLLLLITGGTFNVMSAIGFVVV
LGLIVDDPLLKIETLNKLADQYRKAGREYDETLLHQMIHEAGEICLKPLLMVSLTTSIAL
LPILFIGGIGNDLQRPMAIVIIGGLTIGTFFTTWFIPLAYWYIQKWTGKI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgatcggatatttcatcaaccgtccagttgccatattggttttattcgccgctttgatg
gcatttggcctggtactcatttttcaggtgcctgtatccctgttgcccgctattgatgta
ccacgaatgatcgttaaggtcaatttccctaatgcttccgcaagacaggttgaagatcag
gtgctgaagcctatccgggaacaactgtctttggtagatgatttaaccggcttacattca
gaagcatctaaccacctgggaactgtgtatttggacttcgattaccgtgcgaacatgtcg
ctggcatatatcgaggtaaatgaaaagatggatagactgcttgggcggctaccgcctgat
atgccccgtccgcaggtagtccgcatcaataccagcgatatacctgttgtccgtatccag
gtggtgcctgtttcagatgcaacctatcaggaagtgtcggatctcacagaaaaagttttg
aagcggcggctggagcagctgcccggtgtctcggtagtggacatgaatggacaacgaggt
actgttgccatattgaagcctgacagggaccggatgaatgcctttggtataactacatct
gccttgctggaggccgtgagactttcaaatatggaaattggcggtctgaacctcaaagac
gggcaataccagtatttcatcagactggaaaaccaggtccgtaccgtgagcgatttaggt
aatgtctcagtcaaaggcttatcaggccagcccgtgcaactgaaagaaattgccagcgta
gaaatggacacggaccagcttaccggttatcatctatacaatgggaagcctggtgtagta
gttactgttcaggcacaagccaaaagccgcatgaatgaattgctgccaatgatcagaagt
ttggtcagtgcttttcagaaacagtatccccaggcacgtttcaacatttctcaggaccag
agctttttgcttgatgctggtatagacaatgtaaagcaagatattatactcggtggagcg
ctgaccatcggtttactgtttctatttctcggtaactgggcatcacctgtgctcatgagt
atcagcattccgatatcgctgttgatcacctttatcttctttcaactgtttggcctttcg
ttcaacatcatttccctgtccggtcttgcgctgggcattggtatgctgatagacaattcc
attgtcgtgatcggtgagattacgcgcaagcgcattgccgggctttcagtaactgacagc
gcaattaggggtacaaatgaaatggcggtacccgtgatcagccaggtattgaccacggtg
gtggtctatgctccgctcgtgatactcaacggactttccggagcgctggtgatggaccaa
agtatagcactgaccatatcgctgtttgtctctttattggttgcattcgtattgacaccc
gtgctttataaacttttgctgaagtctccgccagagcggttgaagcaggatactgtattt
tacacttttgtacggaaccggtaccacagcatgatttcgtttgtcttattgaaacgtaag
ctgttctttgcgattacactacttgtaatcgccttgggtgttgggctggcctttttcatt
ccgtttgaaagcctaccggctatcgaaaaaaaagaaagtctgatcaagatcagttggaac
gagccgcttgatttgcaggaaaacaaggcccgctccttggcgctgattgcaaagctatcg
cccgtggttgcagtttcagaaagtgatgtgggtgccacacaatatatttttcagcaggac
ggaacgaccatctatcaggcaaacgtttattatgaatgcgcctctgaaaaggaaaagcta
ctggctgaccggatggtgaaacagcagttggtcaggtatcctaaatgcacctttaatatt
ctcgatgctccgaacgcgtttacacagttgttcgtaaatgatgagccttatgtcagggtt
aaattcaaaccgttggttaaaggaggctcagcacaaaatcttgatattctgacggactgg
cttaaagtgaatcgcgttcaatatgctccagagccatcgatgatgcgcgaaccggctatg
cgtggcgtattggatatggaggcaatgaaccggtatcaaatcaaccgggccgagatagat
cagcaattacaggtgttgtttggaagtgctgaggcgggtgcggtggatgccacaggtgat
aaaactcgtgttttggtgaccgaagcaagcggctcggttgaagaaaagctggacgcggtt
gtcagaaacagcgaggggatcgcctatcccatacgaaagttcattcgttttgaaccggtc
ttgcaattttctgccatcagtgcagacaaagacggcacctaccgatccatcgcgttatct
gaacaacctgatatcaaagccatcttgaatgaaattactgctgaagccagaagccttgga
tacgatgtcgattttacggggaagtattttgaaaaccggcagttaatgcgacaattgtcc
ctcatcttcctgattgtcctggtgatgttgtacacagtcctggcgatccagtttgagagc
tttgtacaacccgtgatcgtcatgctcaccattccgctcggcgttgcgggtgcttgcctg
ctgttgttgattaccggggggactttcaacgtgatgtcggccataggctttgtcgtggtg
ttgggactcatcgttgatgatcccctgctcaaaattgaaacgctgaacaaacttgccgac
caatacagaaaagcaggacgtgaatatgatgaaacgcttttgcaccagatgatacatgaa
gcaggtgaaatctgccttaaacccctgttgatggtgtcactcactacgagtatcgcactc
ctgcctatcctttttattggcgggatcggcaacgacttgcagcgaccgatggctattgta
atcattggtggccttacgatcggtacgtttttcaccacctggttcatcccactggcctat
tggtacattcaaaaatggactggaaaaatctaa
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