Chitinophaga sp. MD30: CK934_06610 Help Entry CK934_06610       CDS       T10354                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism chim  Chitinophaga sp. MD30 Pathway chim03030   DNA replication chim03410   Base excision repair chim03420   Nucleotide excision repair chim03430   Mismatch repair Brite KEGG Orthology (KO) [BR:chim00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CK934_06610    03410 Base excision repair     CK934_06610    03420 Nucleotide excision repair     CK934_06610    03430 Mismatch repair     CK934_06610  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chim03032]     CK934_06610    03400 DNA repair and recombination proteins [BR:chim03400]     CK934_06610 Enzymes [BR:chim01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CK934_06610 DNA replication proteins [BR:chim03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CK934_06610 DNA repair and recombination proteins [BR:chim03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CK934_06610    NER (nucleotide excision repair)     GGR (global genome repair) factors      CK934_06610    MMR (mismatch excision repair)     DNA ligase      CK934_06610   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CK934_06610 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia HHH PSF1_C Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  ASZ10674 UniProt:  A0A249SSN7 LinkDB All DBs Position complement(1663252..1665357) Genome browser AA seq 701 aa AA seqDB search MYTKEIEITLAQLAKDLLAKLQQDQLLQDNNATMEALRRVITYNDWRYYVQSDPVLSDYE YDQLFAWLKKLEVENPHLVSPDSPTQRVALGLTKNFPTVQHLVPMLSLENSYDADDLNDW DRKNREISALSEIEYCIEPKFDGASISLIYENDQLVRGATRGDGVAGDDITTNIKQIRSI PLSANFSSFGIHTIEIRGEVLINKNTFKAFNEQRAADNLPPLANPRNAASGSLRMVDPRE VAKRGLEAFLYHMSYHTMEPGTTAPKEIKTHSNTLDLLSNLGFRSPAKEKKVLKGIQAVI DYCNAFETERDNLPYEIDGMVIKVNDYELQDKMGMTTHHPRWAMAYKFRARQATSKLRKV EFQVGRTGSITPVAKIDPVPIGGVTVGSISLFNEDVVREKDLMIGDTVLVERAGDVIPYI VKSIADLRDGAEAPIVFPTHCPVCKDPLYKPEGESVWRCVNINCEAQVVERIIHFVSKDA MDIRSFGESNVRKFYQLGLLKDIPGIYELDFSKLEQLEGFGKKSLSNLQSAIEQSKTQPL HRLIFGLGIRYVGETTAKTLANSVSHLLELKDRSEEAILALEDIGPKVAGSIRQFFSIHD NIHMLEKLEQLGISLTNTKGSLSAEGTLSGQTFLFTGTLHKLKRSDAEEMVEQQGGKILS GVSSKLNYLIVGDDAGSKLEKAKKINTIKILTEDEFLKLIQ NT seq 2106 nt NT seq  +upstreamnt  +downstreamnt atgtatacaaaggaaatagaaatcaccctcgcgcagctggcaaaagacctgctggcaaaa ttacagcaggaccagttattacaggataacaacgccaccatggaagccctgcgccgcgtg atcacctataatgactggagatattacgtacagagcgatccggtactcagcgattatgaa tacgatcagctgttcgcctggctcaaaaaactggaggtagaaaaccctcacctcgtcagc cccgactcccctactcaacgggtcgcactgggccttaccaaaaacttccccaccgtacaa catctcgtgccaatgctcagcctcgagaactcctacgatgccgacgacctcaacgactgg gatcgtaaaaatcgcgagatcagtgccctctccgagatcgaatactgtatcgaacctaaa ttcgatggcgccagcatctccctgatctatgaaaatgatcaattggtacggggcgccacc cgcggtgatggcgtagccggcgacgacatcaccaccaatatcaaacagatacgatccatc cccctgtctgccaacttctcctccttcggcatacataccatcgaaataagaggcgaagtg ctgatcaataaaaataccttcaaagcattcaacgaacagcgtgccgccgacaacctcccg ccactggcaaatccccgcaacgccgcctccggctccctccgcatggtagatccccgcgaa gtagccaaacgaggcctcgaagcattcctctatcatatgagctatcataccatggagccg ggaacgacagcacccaaagaaataaaaacccatagcaatacactcgacctcctctccaac ctaggcttccgcagccccgccaaagaaaagaaggtcctcaaaggcatacaggccgtcatc gactattgcaacgcattcgaaaccgaacgcgataacctgccctacgaaatagatggcatg gtcatcaaagtcaatgactacgaactgcaagataaaatgggcatgaccacccaccacccc aggtgggctatggcctacaaattcagagcccgccaggctaccagcaaactacgcaaagta gaattccaggtaggccgcaccggctccatcacaccggtagccaagatagaccccgttccc atcggcggcgtaaccgtaggctccatctccctcttcaatgaagacgtagtacgcgaaaaa gatctcatgatcggcgataccgtcctcgtagaaagagccggcgacgtaatcccctacatc gttaagtcgatcgccgacctacgcgatggcgccgaagcacccatcgtattcccgacacat tgccccgtttgtaaagaccccctctacaaacccgaaggagaaagcgtatggcgctgcgtc aacatcaactgtgaagcacaagtcgtagaacgcatcatccacttcgtcagcaaagatgcc atggatatccgcagcttcggcgaaagcaacgtgcgcaagttctaccagcttggcctgctc aaagacataccgggcatctatgaactggacttcagcaaactcgaacaactggagggcttt ggcaaaaaatcactgtccaatctgcaatccgctatcgaacaatccaaaacacaacccctc caccgcctcatattcggactgggcattagatacgtaggcgagaccaccgccaaaacattg gccaactccgtctcccacctgctagaacttaaagaccgctccgaagaagccatcctcgca ctcgaagatatcggccctaaagtagccggctccatccgccagttcttcagcatccatgat aacatccatatgctcgaaaaactggaacaactgggtatcagcctgaccaataccaaagga tccctcagcgccgaaggcaccctcagcggacaaacattcctcttcaccggcacccttcat aaactcaaacgtagcgatgccgaagaaatggttgaacagcagggtggcaaaatcctcagc ggcgtcagcagcaaactcaattacctcatcgttggcgatgatgccggcagcaaactggaa aaagccaaaaaaatcaataccattaagatcctgacagaagatgagttccttaaactcatt caataa

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