Chitinophaga sp. MD30: CK934_07220
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Entry
CK934_07220 CDS
T10354
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chim Chitinophaga sp. MD30
Pathway
chim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK934_07220 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chim03400
]
CK934_07220 (nth)
Enzymes [BR:
chim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CK934_07220 (nth)
DNA repair and recombination proteins [BR:
chim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CK934_07220 (nth)
Prokaryotic type
CK934_07220 (nth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF2400
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASZ10782
LinkDB
All DBs
Position
complement(1813727..1814377)
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AA seq
216 aa
AA seq
DB search
MTKKERFAFVLDYFEKHAPNAETELIYDNTYQLLVAVILSAQCTDKRVNMTTPAIFQQYP
DIESLSHATFDDLFPLIRSISYPNNKTKHLIGMAQMVIEDFNGEIPATVPELVKLPGVGR
KTANVITSVVHHQPNMAVDTHVFRVSARIGLTTNAKTPLQTEQQLLKYIPTEKVHIAHHW
LILHGRYICLARSPKCEECGLRPVCKYYQQNLRKGF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaagagcgcttcgcattcgtattggactacttcgaaaaacatgcaccaaac
gccgaaacagaactgatctacgataatacctaccaactcctggtagccgtaatcctgtct
gcccaatgcaccgataaaagggtcaacatgaccacccccgccatctttcagcaatacccg
gatatcgaaagcctcagccacgccaccttcgacgatctcttcccgctcatccgcagcatc
agctaccccaataacaaaaccaaacatctcatcggaatggcccaaatggtcatcgaagac
tttaatggcgaaatacccgctaccgtaccagaactggtcaaactaccaggcgtaggccgc
aaaacagccaatgtcattacctccgtcgtacaccaccaacccaatatggccgtcgatacc
cacgtattccgggtatccgctcgcatcggccttaccaccaacgccaaaacacccctccag
accgaacaacaactactcaaatatatacccacagaaaaggtacatatagcccaccactgg
ctcatcctgcacggccggtacatctgcctcgcccgctcgccaaaatgcgaagaatgcggc
ctcagacccgtctgcaaatattatcagcaaaaccttcggaaaggcttctaa
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