Chitinophaga sp. MD30: CK934_16305
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Entry
CK934_16305 CDS
T10354
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
chim Chitinophaga sp. MD30
Pathway
chim01501
beta-Lactam resistance
chim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CK934_16305
01503 Cationic antimicrobial peptide (CAMP) resistance
CK934_16305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chim02000
]
CK934_16305
01504 Antimicrobial resistance genes [BR:
chim01504
]
CK934_16305
Transporters [BR:
chim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CK934_16305
Antimicrobial resistance genes [BR:
chim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CK934_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ASZ12409
UniProt:
A0A249SXT6
LinkDB
All DBs
Position
4062828..4066010
Genome browser
AA seq
1060 aa
AA seq
DB search
MISKTFIERKNTTIVIAIIIVIVGLICMFSLPIAQLPDISPPVVDVKAIYIGANSQTVEE
TVTTPTENQINGTPGAMYIQSVSANDGSSSITVTFNIGVDADIAALDVQNRVSLALPTIP
DDVRRTGVTTKKRSNDMLMVVALNSPNGTHDRGFLDNYLNIYLKPELLRVEGIGDVNAFA
QDYSMRIWLKPDKMAALGITTAQVANAVREQNQQVPAGIVGAPPAYSDQAFEYNVKVKGR
LVTPEEFNNIIVATNNQDGSLVRLKDIATINLGTFSYAVDIKADGVIGTGMALYLSPGAN
ALDVADRVDKKLAEMAKTFPPDIQWIVPFETTSFVRISIDEVIETFVIALVLVTFVVFIF
LEEWRATLIPVLVIPVSIIGTFLFFKLLGFSINTLTLFGFVLAIGIVVDDAIVVVEAVQH
HIDTDRMSPRDATYKAMSEVQAPVIAIALILAAVFVPVAFIPGVSGRLYQQFALTIAFSV
LLSAFFALTLTPALCVMLLRESHVTKKSTGINKLFYRFNQWFGRTTERYGRMVRRAIHAT
PLVLIGLAIIFTIAFFLFRMVPTTFIPQEDMGSFLIAVELPEASSTGRTKAVVDQINQVL
SKDKAVQHYMGVTGINFVANAIKPNSATYFVNLQPWDQRYKKGAHDDMNAVIGRVQGQLM
QIPSATIFCIPSPTLRGFGTSSGFSFILEQKTGTDVQEFNQVLGRFLAAANKRKEIMRAY
TFFSAATPEYNVSVDRDKCKQMGVAVGDVFSTLQTYLGGLYVNDFTRFSRSFRVVMQADT
AYRRSIDNLNTYYVKNQRGNMVPLSAVITATKEGSAPVLNHYNLYRSVEIDGVNNFGYSS
GDAIKALEEVAAEVLPNNYGYEWANISKQEIEAGNKSTMIFMLSILFVFLLLTALYESWS
VPLAVLLAVPIALFGSIVALFLAKQQNSVYSQIGLITLIGLAAKNAILIVEFCKERVDGG
MPLIPATLEAVKLRFRPILMTSFAFILGVLPLCLAKGAGAAARLNIGFTVVGGMLAATLL
AIFSVPVLYVLITRLAYGKKKLAELEAAGEERRKPGRLGE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaagaccttcatagaacgtaagaatacaacgatcgtaatcgccatcatcatc
gtgatcgtgggattgatctgtatgttctcgctgcctattgcacaattgccggatatttcc
ccgccggtagtggatgtgaaggctatctacataggcgccaactcacagacagtggaagag
acggtgacgactcctacggagaaccagatcaatggtacccccggtgccatgtatatacaa
tcggtgagtgccaacgacgggtccagcagtattaccgttacttttaatatcggcgtagat
gccgatatcgcggcgctggatgtacaaaaccgtgtaagcctggcattacctactatacca
gatgatgtaagacgtacaggggtaacgacgaagaaacgctcgaatgacatgttgatggta
gtcgcattgaactctcccaatggtacgcatgacaggggatttctggacaactatctgaat
atttacctcaagccggaattgttacgtgtagagggtatcggtgatgtgaatgcttttgcg
caggactacagtatgcgtatctggctgaagccggataagatggctgctttaggcattact
actgcccaggtagccaacgcggtccgcgagcagaaccagcaggtacctgctggtattgtc
ggggctccgccggcatacagtgatcaggcctttgaatataatgtaaaggtgaagggcagg
ctggtaacaccagaggagttcaataacatcattgtagcgaccaataaccaggatggttcg
cttgtacggctgaaagatatcgcgaccattaatctcggcaccttttcctatgcagtagat
atcaaagcagacggtgtgatcggtaccgggatggcgctctacttatcgcccggcgccaat
gcgctggatgtagcagatcgcgtggataagaagctggcggagatggccaaaacattccca
cccgacatacaatggatcgtgccgtttgaaaccacctcgttcgttcgtatctctattgat
gaagtgatcgagacattcgtgatcgcgctggtgctggtaacatttgtagtatttatcttc
ctggaagaatggagggccacgctgatacccgtgctggtcattccggtatccattatcggt
actttcctctttttcaaactgctgggattctccatcaatacgttaacattattcggtttt
gtactagctatcggtattgtggtggatgatgcgatcgtggtcgtggaagcggtccagcat
catatcgatacggatcgtatgtcgcccagggatgccacctacaaggcgatgagtgaagta
caggcgccggtgattgccattgcacttatactggcagcggtattcgtaccggtggcattt
atacccggtgtgagcggccggctgtatcagcaatttgcgctgaccattgctttttctgta
ttgttatctgcattttttgccctgacgcttacgcccgccttgtgtgtgatgttgttgcgg
gagagtcatgtcacaaaaaagtcgaccggtatcaataagttgttctaccggttcaaccag
tggtttggccgtacgacggaacgttatggccggatggtaagaagggctattcatgcgacg
ccgttggtgttgataggtctggccatcattttcaccattgcttttttcctgttccgtatg
gtgcctaccacctttattccacaggaagatatgggctctttcctgattgcagtggagtta
ccggaagcctcttccaccgggcgtaccaaagccgtagtggaccagatcaaccaggtatta
tcaaaagacaaggcggtacaacactatatgggtgtaaccggtatcaactttgttgccaat
gcgatcaagcccaattccgccacctattttgtgaacctgcagccctgggaccagcggtat
aaaaaaggtgcacatgatgatatgaatgctgtgataggaagggtacagggacagttgatg
cagatacccagcgcgaccattttttgtattccttcgcctacattgcggggatttggtacg
agttcgggtttctcttttatattagaacaaaagactggaacagatgtgcaggagttcaat
caggtattgggtcgtttcctggcagctgccaataaacggaaagagatcatgcgggcttat
accttcttcagtgccgctacgccggaatacaatgtgtcagtagaccgtgataaatgcaaa
cagatgggggtggctgtcggcgacgtctttagtacgttacaaacttatctcggcgggttg
tatgttaatgattttacccggttcagtcgtagtttccgggtggtgatgcaggcggatacg
gcttaccgcaggagtatcgataacctgaacacttattatgtaaagaaccagcgtggtaac
atggtgccgttgagtgctgtgatcactgctacgaaagaaggaagtgcgcccgtgctaaac
cactataacctgtatcgttctgtagagatagatggggtcaacaatttcggatatagtagc
ggcgatgctattaaggcattggaagaagtggcagcagaggtgctgcctaataactatggt
tatgagtgggcgaatatttctaaacaggagatagaagcaggtaataagagtacgatgatc
ttcatgttgtctatcctgtttgtgttcctgttgctgacggcattgtacgaaagctggtcc
gtgccgttggcggtattgctggcggtgcctatcgctttgttcggctccatagtggcattg
ttccttgccaagcagcaaaatagtgtgtattcacagatcggcttgatcacgctgatcggt
ctggcagcaaaaaatgctattttgatcgtagagttttgtaaggagcgggtggatggcggt
atgccattgatcccggcgacactggaggcggtaaagttgcgtttccgtcctatattaatg
acatcctttgcatttatactcggggtactgcctttatgtctggctaaaggagcgggtgcc
gctgctcggttgaatattggttttacggtggtaggggggatgctggcggctaccttgttg
gctattttcagcgtaccggtgttgtatgtattgatcacccggctggcctatggcaagaag
aaactggccgagctggaggctgcgggagaggagcgaaggaaacctggccgtctcggggag
taa
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