Chondrocystis sp. NIES-4102: NIES4102_23050 Help Entry NIES4102_23050    CDS       T05085                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism chon  Chondrocystis sp. NIES-4102 Pathway chon03030   DNA replication chon03410   Base excision repair chon03420   Nucleotide excision repair chon03430   Mismatch repair Brite KEGG Orthology (KO) [BR:chon00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NIES4102_23050    03410 Base excision repair     NIES4102_23050    03420 Nucleotide excision repair     NIES4102_23050    03430 Mismatch repair     NIES4102_23050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chon03032]     NIES4102_23050    03400 DNA repair and recombination proteins [BR:chon03400]     NIES4102_23050 Enzymes [BR:chon01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      NIES4102_23050 DNA replication proteins [BR:chon03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      NIES4102_23050 DNA repair and recombination proteins [BR:chon03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      NIES4102_23050    NER (nucleotide excision repair)     GGR (global genome repair) factors      NIES4102_23050    MMR (mismatch excision repair)     DNA ligase      NIES4102_23050   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       NIES4102_23050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD BRCT_2 PTCB-BRCT HHH Motif Other DBs NCBI-ProteinID:  BAZ45285 UniProt:  A0A1Z4RS40 LinkDB All DBs Position complement(2611528..2613570) Genome browser AA seq 680 aa AA seqDB search MNIDPQIQQKVAQLKEQLQKAGYAYYVLDNPIMEDGVYDQLYRQLQEYEAQYPQLITPDS PTQRVGEKPASQFTSVKHNIPLYSLENAFNSQELAKWETRWQKQLETIPDFQYVCELKID GSAIALTYENGILVRGATRGDGVKGEDITQNVKTIRTIPLKISLPQDNLPSKIEVRGEAF LPLAVFTQINQERSKQGEALFANPRNATAGTLRQLDSKIVAGRQLNFYAYTLHIEGAAEV TSQWQSLELLQEMGFLVNPNRQLCASLTEVTSYFEQWDTGRKSLPYMTDGVVVKLNNYQL QQQLGFTQKFPRWAIALKYPAEESPTIVKDIIVNVGRTGAVTPMAIMQPVQLAGTTVQRA TLHNSDRVTELDIRVGDTVIIRKAGEIIPEVVRVLSDLRPPGTIAYQMPSCCPECNSPLV RPDKEAVTRCINSCCPAIVRGNIIHFCSRNAMDIQGLGERIVTLLINNNLVKSVADLYTL TVDQIANLERMGSKSAEKLVSAIAASKKQPYDRVLYGLGIRYVGNVNAKILTTNFPNIEQ LSQASFESIESVYGIGEEIAQSVFEWLRIPDNQALIHNLQVLGLQFSQITDINNNSDSQA VKIFLGKTFVLTGTLPSLTRDEATKLIEEAGGKVTSSISKKTDYLLLGENAGSKLAKAEK LGIAQLSEADLLKLLDLEEV NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt atgaatatagatccacaaatccaacaaaaagttgcccaattaaaagaacaattacaaaaa gcaggatacgcttattatgtattagataatcccattatggaagatggggtatatgaccaa ctatatcgtcagttacaagaatatgaagcgcaatatcctcaattaattacccccgacagc ccaacccaacgagtgggagaaaaaccagcttctcaatttacctcagttaaacataatatt cccctctacagtttagaaaatgcctttaactcccaagaattagctaaatgggaaacgcgc tggcaaaaacaactagaaactattccagatttccaatatgtatgtgaattaaaaatagat ggtagcgcgatcgctcttacttatgaaaatggtatcttagttcgtggtgcaacccgtgga gatggggtaaaaggagaagatattacccaaaatgtcaaaacaatccgcactataccgtta aaaatcagtttaccacaggataatttgcctagcaagatcgaagttaggggggaggctttt ttacccttggcggtatttacacaaatcaaccaggaaagaagtaagcagggcgaggcttta tttgctaacccgcgtaatgcaacggcaggaactttacgacaattggattctaaaattgtt gcaggacgacaacttaatttctatgcctacactctacatatagaaggtgcagcagaagtt acttctcaatggcaatcattagaattgctgcaagagatgggttttttggtcaatcctaac cgtcaattgtgtgcttccttaactgaggtaacaagctattttgaacaatgggatacaggg agaaaaagcttaccctatatgactgatggagttgtggtaaaactcaacaattatcaactt caacaacaattaggatttactcaaaagtttcctcgttgggcgatcgctcttaaatatcct gctgaagaatctcccaccatagttaaagatatcattgtaaatgttgggcgtacgggggct gttaccccaatggcaattatgcagcctgtgcagttagcagggacaacagtacaaagggcg actttacataatagcgatcgcgttacagaattagatattcgcgttggtgatacggttatt attcgcaaagctggagaaatcataccagaagttgttagggttttaagcgatttacgcccc cctggtactattgcctatcagatgccaagttgttgtcctgaatgtaattcacctctagtg cgccccgataaggaagctgttaccaggtgtattaatagttgttgtcctgctattgtacgc ggtaatattattcatttttgctctcgtaatgcaatggatattcaagggttgggggaaaga attgttacattgttaattaataataatttagtaaaatcagtagcagatttatatacatta actgttgatcaaattgccaatttagagcgcatgggtagcaaatcggctgaaaaattagta agcgcgatcgcagcatctaaaaagcaaccttacgacagggttttatatggcttaggtatt cgctatgttggtaatgttaacgccaaaattttaacaactaactttcctaatatcgaacaa ttatctcaagcatcttttgaatctatagaatcagtatatggcatcggtgaagagattgcc cagtccgtttttgaatggttgaggatacctgataatcaagctttgatccataatttacaa gtattaggtttacaattttcccagataacagatattaataataacagtgatagtcaagct gttaaaatatttttaggtaagacctttgtcctaacaggaactttacccagtttaactaga gatgaagctacaaagttaatcgaggaagcaggaggaaaagtaactagttcaattagtaaa aaaactgactacttgttattaggagaaaatgcgggatctaaattagctaaagcagagaaa ttaggtattgcacaattaagtgaggcggatttattaaagttattggatttagaagaggtt tga

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