Chromobacterium phragmitis IIBBL 274-1: DK843_00085
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Entry
DK843_00085 CDS
T05744
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb01501
beta-Lactam resistance
chrb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DK843_00085
01503 Cationic antimicrobial peptide (CAMP) resistance
DK843_00085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chrb03036
]
DK843_00085
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrb02000
]
DK843_00085
01504 Antimicrobial resistance genes [BR:
chrb01504
]
DK843_00085
Chromosome and associated proteins [BR:
chrb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DK843_00085
Transporters [BR:
chrb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DK843_00085
Antimicrobial resistance genes [BR:
chrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DK843_00085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
HH_AprE
BSH_CusB
RND-MFP_C
BSH_YknX
CzcB_C
BSH_Fcp1
YknX_C
Biotin_lipoyl
HH_EMRA
Beta-barrel_ALG44
Motif
Other DBs
NCBI-ProteinID:
AXE32841
UniProt:
A0A344UC43
LinkDB
All DBs
Position
15427..16557
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AA seq
376 aa
AA seq
DB search
MATSENTHMNIRLCLSALFLLSLAACGKGGAEHASASGKNASAPAARRLSGADVVRAEVK
PLAAAIPFTGSLNALTSSAVASEVDANVREVRVREGETVRRGQLLAVLDAESLGQSVAEQ
NAQLDNSKARLKLAKVKLDKQRELLGKGFISQVAFDELESDYRVREGELRAQAAQLARAQ
RSLADARVKSPIDGVVYERKINPGEVASRNMKLFSVADLAVLEIAATVPSRLVAQAKVGM
AATFSVDGRDGRERGEVVRINPVAIPGTRSFTLFIRVKNPDGHLKVGQFAKGGVVVREVK
DKPVVPISAVRDIDGAPWVLVVEQGRLAKRPVTVALRAENERLAAIDGLAAGASVIVGEL
LGSKAGDAVSLPAGLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggccacatcggaaaacacacacatgaatatacgtctttgcctgtccgccctgtttctt
ctatcgctagccgcctgcggcaagggcggcgccgagcatgcgtccgcctccggcaaaaac
gcgtcggcgccggcggcgcgccgtttgtccggcgccgatgtggtgcgggccgaggtgaag
ccgctcgccgccgccattccgttcaccggctcgctgaacgccttgaccagcagcgcggtg
gcgtccgaggtggacgccaatgtccgcgaagtgcgggtgcgcgaaggggaaacggtgcgc
cgcgggcagctgctggcggtgctggacgccgagtcgctgggccagtcggtggcggagcag
aacgcccagctggacaattccaaggcgcggctgaagctggccaaggtcaaactggacaag
cagagggagctcttgggcaagggcttcatctcccaggtggcgttcgacgaactggagagc
gactaccgggtgagggagggcgaattgcgcgctcaagccgcccagttggcgcgggcgcaa
cgttcgctggccgacgcgagggtgaagtcgccgatagacggcgtggtctacgaacgcaag
atcaatcccggcgaggtggccagccgcaatatgaagctgttctcggtggcggacctggcg
gtgctggaaatcgccgccaccgtgccgtcgcgcctggtcgcccaagcgaaggtgggcatg
gcggccaccttcagcgtggatgggcgagacgggcgggagcgcggcgaagtggtgcgcatc
aatccggtggccatacccggcacccgcagcttcacgctgttcatccgggtgaagaatccg
gacgggcatctgaaagtgggccagttcgccaagggcggcgtggtggtgcgagaggtgaaa
gacaaaccggtggtgcccatttccgcggtgcgcgacatcgatggcgcgccctgggtgttg
gtggtggagcagggcaggctggccaagcggccggtgacggtggcgctgcgcgcggagaac
gagcggctggcggcgatcgacggcctggccgccggcgccagcgtgatcgtcggcgaactg
ctgggcagcaaggcgggcgatgccgtcagcctgccggccggcctgggttga
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