Chromobacterium phragmitis IIBBL 274-1: DK843_06865
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Entry
DK843_06865 CDS
T05744
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK843_06865 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_06865 (nth)
Enzymes [BR:
chrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DK843_06865 (nth)
DNA repair and recombination proteins [BR:
chrb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DK843_06865 (nth)
Prokaryotic type
DK843_06865 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AXE34046
UniProt:
A0A344UFJ8
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All DBs
Position
1418643..1419275
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AA seq
210 aa
AA seq
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MNPAKRQEIFRRLREDNPHPATELEYNTPFELLISVLLSAQATDVGVNKATRRLYPVANT
PAAMLALGEESLADFIKTIGLYKTKARNVIATCRLLLERHGGEVPQTREALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVSNRTRLAPGKDVREVEDKLERFVPAEFKRDAHHWLI
LLGRYVCKARKPECQRCAIADLCEYPAKPL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcccgccaaacgacaggaaatcttccgccgcctgcgcgaagacaatccccatccc
gctaccgaactggaatacaacacgccgttcgaactgctgatctcggtgctgctgtcggct
caggccaccgacgtgggcgtcaacaaagcgacgcgccggctgtatccggtagccaacacg
cccgccgcgatgctggcgctgggcgaagaaagcctggccgacttcatcaagaccatcggc
ctgtacaagaccaaggcccgaaacgtgatcgccacctgccgcctgctgctggaacgacac
ggcggcgaagtgccgcaaacgcgcgaggcgctggaagcgctgcccggcgtcggccgcaaa
accgccaacgtggtgctcaacaccgccttcggccagcccaccatcgcggtggacacccat
atcttccgcgtgtccaaccgcacccgtctcgcgcctggcaaggacgtgcgcgaagtggag
gacaaactggagcgtttcgtccccgccgaattcaaacgggacgcgcaccactggctgatt
ctgctcggccgctacgtttgcaaggccaggaagcccgaatgccagcgctgcgcgatagcg
gatctctgcgaatacccggccaagcccttatga
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