Chromobacterium phragmitis IIBBL 274-1: DK843_10035 Help Entry DK843_10035       CDS       T05744                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism chrb  Chromobacterium phragmitis IIBBL 274-1 Pathway chrb03030   DNA replication chrb03410   Base excision repair chrb03420   Nucleotide excision repair chrb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:chrb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DK843_10035    03410 Base excision repair     DK843_10035    03420 Nucleotide excision repair     DK843_10035    03430 Mismatch repair     DK843_10035  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:chrb03032]     DK843_10035    03400 DNA repair and recombination proteins [BR:chrb03400]     DK843_10035 Enzymes [BR:chrb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DK843_10035 DNA replication proteins [BR:chrb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DK843_10035 DNA repair and recombination proteins [BR:chrb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DK843_10035    NER (nucleotide excision repair)     GGR (global genome repair) factors      DK843_10035    MMR (mismatch excision repair)     DNA ligase      DK843_10035   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DK843_10035 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia BRCT_2 Motif Other DBs NCBI-ProteinID:  AXE34609 UniProt:  A0A344UH61 LinkDB All DBs Position complement(2059120..2061528) Genome browser AA seq 802 aa AA seqDB search MTAYETRAAELRELLNRYGHEYYVLDAPTVPDAEYDRLFRELQALEEGYPALVVADSPTR RVGGAPLAEFDSIVHAVPMLSLSNAFSDMQLADPAERHAELIQFDERVRKGLDAAEVEYA TEPKFDGLAISLLYENGVLARAATRGDGVAGEQVTENVRTIRAIPLKLDGANPPALLEVR GEVLMLKRDFERLNADQIERGDKTFANPRNAAAGSLRQLDSRITAQRRLSFFAYAIAQVA GADWPDTHGGEMAWLKQLGFPVVEESLRPVVKGVAGLSAYYEDVMSRRAGLPFEIDGVVY KVNRRDLQDALGFVSRAPRWAIAHKFPAEEALTVVEAIEEQVGRTGAITPVARLQPVFVG GVTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLERRPMRPAEGGDLFSAG EAPQYPAYRLPTACPVCGSHVMREEGEAIARCSGGLSCRAQRSQAIQHFAGRRMMDIDGL GERYIDKLVEYGYIKSVADLYRLTLEDLLEMKRRADEDEGVTPETVKAGKVASKWAENLI EAIDASRAPPLARLLFALGIRHVGESTAKTLADWLGSMALIRRCPAALFAALPDIGGVVA DSLADFFAEDNNEKALDALLAEVKPADEHAPSPKLRERLDDGALLARLGIPRLTEVRSQQ LAAQRGLAWLAQSERRALLALELPAEVVNALADWLDAPGRREAVGRLAGLRDGILAGLPE AAEAAALPLDGKTLVLTGTLPTLSRDQAKALIEAAGGKVSGSVSKKTHYVVAGEEAGSKL AKAQELGVAILDEAGLRALLGG NT seq 2409 nt NT seq  +upstreamnt  +downstreamnt atgaccgcatatgaaacgcgcgcagccgaactgcgcgagttgttgaaccgctacggccac gagtactacgtgctggacgcgccgacggtgcccgacgccgaatacgaccgcttgttccgc gaacttcaggcgctggaagagggctatccggcgttggtcgtcgccgattcgccgacccgc cgcgtcggcggcgcgcctttggccgagttcgacagcatcgtgcacgcggtgccgatgctg tccttgtccaacgccttttccgacatgcagctggccgatccggccgagcgccacgccgag ctgatccagttcgacgagagggtgcgcaagggactggacgcggcggaggtggaatacgcc accgagcccaagttcgacggcctggccatttcgctactgtatgaaaacggcgtgctggct cgcgccgccacccgcggcgacggcgtggccggcgagcaggtgaccgagaacgtgcgcacc atacgcgccattccgctgaagctggacggcgcgaatccgccggcgctgctggaggtgcgc ggcgaggtgctgatgctgaagcgcgatttcgagcgcctgaacgcggatcagatcgaacgc ggcgacaagactttcgccaacccgcgcaatgccgccgccggcagcctgcgccagctggat tcgcgcattaccgcgcagcgccgtttgtccttctttgcctacgccatcgcccaggtggcg ggcgcggactggccggacacccatggcggcgaaatggcctggctgaaacagctgggcttc ccggtggtggaggaaagcctgcggcccgtggtcaagggcgtggcgggcttgtccgcatat tacgaagacgtgatgtcgcgccgcgccggcctgccgtttgagatagacggcgtggtgtac aaggtgaaccggcgcgatttgcaagatgccttgggcttcgtctcgcgcgcgccgcgctgg gccatcgcccataaattcccggccgaagaggcgctgaccgtggtcgaggccatcgaggag caggtgggccgcaccggcgccatcacgccggtggcgcggctgcagccggtcttcgtcggc ggcgtcaccgtcaccaacgccaccctgcacaacgaggacgaggtgcggcgcaaggatgtg cgcgtcggcgacaccgtgatcgtgcgccgcgccggcgacgtgatccccgaagtggtgtct gtggtgttggagcgccggccgatgcggccggctgaaggcggcgacctgttcagcgccgga gaggcgccgcaatatccggcctataggctgccgacggcctgcccggtgtgcggcagccac gtgatgcgagaagaaggcgaagccatcgcccgctgctccggcggcctgtcttgccgcgcc cagcgcagccaggcgatccagcacttcgccggccggcgcatgatggatatcgacggcctg ggcgagcgctacatcgacaagctggtcgagtacggctacatcaagagcgtggccgacctg taccggctgacgctggaagacctgctggagatgaagcgccgcgccgacgaggacgagggc gtgacgccggagacggtcaaggccggcaaggtggccagcaagtgggcggaaaacctgatc gaggcgatagacgccagccgcgcgccgcccttggcgcggctgttgttcgcgctgggcatc cgccacgtcggcgaatccaccgccaagacgctggccgactggctaggtagcatggcgctg atccgccgctgtccggcggcgctgttcgccgcgctgccggacattggcggcgtggtggcg gactcgctggccgactttttcgccgaggacaataacgagaaagcgctggacgccttgctg gccgaggtgaagcctgccgacgagcatgcgccgtcgcccaagctgcgcgagcgcctggac gatggcgcgctgttggcgcggctgggcatcccccggctgaccgaggtgcgcagccagcag ctggcggcgcagcgcggcctggcctggctggcgcagagcgagcgccgcgcgctgctggcg ttggagctgccggcggaggtggtcaacgcgctggccgattggctggacgcgcccggccgg cgcgaggccgtgggccgcttggccggcctgcgcgacgggatactggccggcctgccggag gcggcggaggccgccgcgctgccgctggacggcaagacgctggtgttgaccggcacgctg ccgaccttgagccgcgatcaggccaaagctttgatcgaggccgccggcggcaaggtatcc ggcagcgtgtcgaagaaaacccattatgtggtggcgggcgaggaggcgggaagcaagctc gccaaggcccaggagctgggcgtcgccattttggacgaagccgggctgcgggccttgctg ggcggctga

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